Pseudomonas aeruginosa X13273, Q013_02457
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa X13273 genomic scaffold adgeE-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAGCGCGAGGGCGACGCCCTCGAACTGGCCCGGCATTTCGCCGAACGCGCCTGCGTGTTCCTGCGCCGCGCGCCGCTGGGCTGGTCCGCGGAAGCGCTG GAACTGCTCGACGGCTATGGCTTTCCCGGCAACGTTCGGGAGCTGAAGGGACTGGTGGAATGCGCGGTACTGCTCTGCGAAGGCGATGTGCTGCTGGCCG AACACTTTTCCCTGCGCGCGCCCCCGGAAGCGGAGGCGCCGCTCAAGCTGCGCGAGCACCTGGAGCAGATCGAACGCGACCTGCTGCTCGCCTGCCTGCG CAGGAACGCTGGCAACCAGACCCTCGCCGCGCGCGAACTGGGTCTGCCGCGCCGAACCCTGATCTATCGCATGGGACGCCTGAACATTCATTTCGGCGAT CCCCGGACCTGAAGCCCATGATCGAGATTTCCTTCCATCCAGCCCTGCCGGGCGCGCGCCTGGAGCGTGGCGTCCGCGGCCCTTCCATGGAGACTCCCTG
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| DNA Sequence for Gene |
>Q013_02457
ATGCCTGTTCGTCACTGGCCCGCCGTGCTTCTGGCCCTGGCCGTCCTCTGCGGCCTCGCCGGTTGCAGCGGCAACTACAAATTCAACGACGGCGACTATC GCCCGCTTGGCGATCCGCAGGCGGTCAATCGCGGCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCAAGGAGCGATCTCATGGAACTGGTATTGGAAATGCTCAGCGCCAAGCAATTCGTACCGACGGAGCTGTGCAGCAAGACCTTCGGCAGGAACGGCGG CCTCATCGGCCGCGGCGGTGAGTGCGACTGGGCGATTCCCGATCGCAAGCGGCACCTGTCCAAGCAGCATGCGCGGGTCAGCTATCGCAACGGCGCGTTC TACCTGACCGACACCAGCAGCAACGGCATCCGCGCCGGCAACGGCAGCCGCCTGCCGCATGGCGAGCCGCAGCGCATTGAGCAGGACAGCGTCTTCCTGC TCGGCGACTTCGAGATCCGCGCGCGGCTGCTGCGCGAGCCCGACGAGTTCGCCATGGACGTCGGGCGGCCGCAGCCGGCGGGCAGCATCATTCCGGACGA TGCCTTCCTGGCCCTCGATCCGTTGCAGGCGCTCGACCAGGACGGTGCAGATGCCTACGAACTCGACGACCTGAGCGCAATCGCCCAGCCCAGCCAGGAG
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| Amino Acid Sequence |
>type VI secretion protein
MPVRHWPAVLLALAVLCGLAGCSGNYKFNDGDYRPLGDPQAVNRGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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