Strain | Pseudomonas aeruginosa BWHPSA001 genomic scaffold adges-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GATCTCGCGCCCGGGATGGAAGATCTGCGACAGCACCACACAGCCTTCGGCGTGGCAGGCCTCGGCGACCCGCCGGTAGCCGGGGATGCAGGCATCGTCG GTGGCCATCAGCACGTGCGAGGTGTAGCGCGCGCTGTCGTGGACCCCCGCCACCTGCATGACGATCAGTCCGGCGCCGCCGCGGGCCCGGGCGCGGTGAT AGGCGACGAGTGGCTCGTTGACCAGGTTGTCGGTAAGCATCGACGTGTCGTGGCCGCTCGACATGATGCGGTTTTTCAGGCGTTTGCCCCGGATTTCCAG GGGGCTGAACAGGTGCGGGAAATTCACGGTTGGCGTCCTTCTTGTTGTTCTCGCGGCGCGCTTCAGAAACAGGATATGAATTTACCATCAGTAAAAAATC AACTTGTTTTTTTAAAATCGACTGGATAGTTTCTGTCCCGTGGCCGCTTCCCGGCGGCTCGCTGCGATCCACTCCACAACAAGAACAAGAGGAGACGCAC
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DNA Sequence for Gene |
>Q014_04813
ATGAACCGTTCCTTTCCGTTGCGCCGCGCGGCCAGCGCCCGTCCGCACCCGGTTTTTCCTTGCCGCGTCCTGCTCGGCGCCGTCCTGCTGGCGTTCGGCG GCCTCGCGCCGGTCCAGGCCGATGATGGCCTGGTGGTGGTCGGCTACGGCGGCGCCGGACAGAAGGCCCAGGAGGTGGCGTTCTTCCAGCCGTTCACGCA GCAGACCGGGATTCCCGTAGTGCAGAGCGAGTACAACGGCGAGATGGCCCGGATCAAGGTGATGGCCGATACCGGTCACGCCGACTGGGACCTGGTCCAG GTCGAGGGGCCGGATCTGGCGCGCGGTTGCGACGACGGCCTGTTCGAGCGTCTGGACTGGCAGGCCATCGGCGGCAAGCAGCAGTTGATCGCCAATGCCG CCCAGGAATGCGGTTCCGCCGCGCTGGTCTGGGGCGTGGCGATCGGCTACGACGCCGACCGGCTGCAACAGCCGCCGGCGTCCTGGGCCGACTTCTGGGA CGTCCAGCGCTTCCCCGGCAAGCGCGGCCTGCGCAAGCGGGCGATCTACAACCTGGAGTTCGCCCTGCTCGCCGACGGCGTGCCACGCGAGCAGGTCTAT CCGCTGCTGGCGACCCGCGCCGGTGCCGACCGTGCCTTCGCCAAGCTGGGCCAGCTCAAGCCCTACATCCAGTGGTGGGAGGCGGGAGCGCAGCCGGCGC AGTGGCTGGCCGCCGGCGACGTGGTGATGACGTCCACCTACACCGGGCGCATCGCCGACGCCCACCGCGCGAGGCGCAACCTGGCCCTGGTATGGCCGGG CAGCCTGTACGGCATGGACTACTGGGCGGTGGTCAAGGGTTCGAAGCGCGGCGCCGAGGCGCGTCGCTTCATCGCCTTCGCCAATGCCCCGGATGCCCAG GTGCGCTACGTCGAGAACATTCCCTACGGGCCGACCAACCGCCAGGCCGCCCAGCGCCTGCCCGCGCAACTGGCGAGCTGGGTGCCGACCGCGCCGGCGA ACCTGGAGCAGGGCCTGGCGATGGACGACGAATTCTGGGTCGAGCACGGCGAGGAGCTGGAGGAGCGCTTCAACGCCTGGGCCAGCCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACGGGCGCCACGTAACCTGCGATCATCGGGGCTGCCCGCCGGTGGTCGCGGGCGACGAGCAGGAGCCGCGAAAGGATGAACCAGGAAGTGCGCTTTTCC CGTCTGGAGCCAGAGCAGCGCAAGGCGCTGCTGATCGAGGCGACCCTGGCCTGCCTGAAGCGGCATGGCTTCCAGGGCGCCTCGGTGCGCAAGATCTGCG CCGAGGCCGGGGTATCGGTGGGCCTGATCAATCACCACTACGATGGTAAGGACGCGCTGGTGGCCGAGGCGTACCTGGCGGTCACCGGACGCGTCATGCG CCTGCTCCGCGGTGCCATCGACACCGCGCCGGGCGGCGCCCGCCCGCGGCTCTCGGCGTTCTTCGAGGCATCCTTCTCCGCCGAGCTGCTCGATCCGCAA TTGCTCGACGCCTGGCTGGCGTTCTGGGGTGCGGTGGGCAGCATCGAAGCGATCGGGCGGGTCCACGACCATTCCTATGGCGAGTACCGGGCGCTGCTGG
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Amino Acid Sequence |
>hypothetical protein
MNRSFPLRRAASARPHPVFPCRVLLGAVLLAFGGLAPVQADDGLVVVGYGGAGQKAQEVAFFQPFTQQTGIPVVQSEYNGEMARIKVMADTGHADWDLVQ VEGPDLARGCDDGLFERLDWQAIGGKQQLIANAAQECGSAALVWGVAIGYDADRLQQPPASWADFWDVQRFPGKRGLRKRAIYNLEFALLADGVPREQVY PLLATRAGADRAFAKLGQLKPYIQWWEAGAQPAQWLAAGDVVMTSTYTGRIADAHRARRNLALVWPGSLYGMDYWAVVKGSKRGAEARRFIAFANAPDAQ VRYVENIPYGPTNRQAAQRLPAQLASWVPTAPANLEQGLAMDDEFWVEHGEELEERFNAWASQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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