Strain | Pseudomonas aeruginosa BWHPSA001 genomic scaffold adges-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGTTCCAAGCGTACCGGCCCGGACCTGGCCCGCGTCGGCGGCCGTTACTCCGACGACTGGCACCGCGCGCACCTGTACAACCCGCGCAACGTGGTGCCC GAGTCGAAGATGCCTGCCTACCCGTGGCTGGTAGAGAACAAGCTTGATGGCAAGGACACCGCCACCAAGATGGAAGTCCTGCGCAAGCTGGGCGTGCCTT ACACCGACGAGGACATCGCCGGTGCACGTGAAGCCGTGAAGGGCAAGACCGAGATGGACGCCCTGGTGGCGTTCCTTCAAGGCCTGGGAACCTCTATCAA GAGCAAACGGTGAGTGTGATGGATATCGGGACTCTGCGTGGACTGGGCACCGTGGTGATCATGGTCGCCTTCATCGGCCTGGTGATCTGGGCCTACAGCG GCAAGCGCAAGAAGAGCTTCGACGAAGCGACGATGCTGCCCTTCGCAGACGATCCCGAAGCCAAAAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGA
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DNA Sequence for Gene |
>Q014_03243
ATGACGACCTTCTGGAGTCTGTACATTACAGCTCTCACCCTCGGCACCCTGCTGGCGCTGACCTGGCTGATCTTCGCCACCCGCAAGGGCCAGCGCAGCA GCACCACCGACGAGACCGTGGGCCACTCCTACGACGGCATCGAGGAGTACGACAACCCGCTGCCGAAGTGGTGGTTCATGCTGTTCGTCGGCACCCTGGT GTTCGCCGTGGGGTACCTGGCCCTGTACCCGGGCCTGGGCACCTGGAAAGGCCTGATGCCGGGCTACCAGTCCGCCGACGAATTCGCCGACAAGGAAAAA GGCTGGACCGGCGTCCACCAGTGGGAAAAGGAAATGGCCAAGGCCGACGAGAAATACGGCCCGATCTTCGCCAAGTTCGCCGCGATGCCCATCGAGGAAG TCGCCAAGGATCCGCAGGCGGTGAAAATGGGCGGTCGCCTGTTCGCCTCCAACTGCTCGATCTGCCACGGCTCCGACGCCAAGGGCGCCTACGGCTTCCC CAACCTGACCGACGCCGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGGCTGGCCGCCACGCCGCCATGCCGGCCTGGGGTGAA GTGATCGGCGAGGAAGGCGTGAAGAACGTCGCCGCTTTCGTCCTCACCCAGATGGATGGCCGCAAGCTGCCGGAAGGCGCCAAGGCAGACATCGAGGCCG GCAAGCAGGTCTTCGCTACCACCTGCGTCGCCTGCCACGGTCCGGAAGGCAAGGGCACCCCGGCGATGGGCGCTCCCGATCTGACCCACCCCGGCGCGTT CATCTACGGCTCCAGCTTCGCGCAACTGCAGCAGACCATCCGCTACGGTCGCCAGGGTGTGATGCCGGCGCAACAGGAACACCTGGGCAACGACAAGGTG CACCTGCTGGCCGCCTACGTATACAGCCTGTCGCACGGCGAGAAGAGCGCCGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCTCCCTCCCCCACGACCCAGACGGCGCCGGCAACCCCGGCGCCGTTTTATTTTGTGCAAAAGAAAAGCGCGAATGGGACAATACGCGACCAAAAGTC GCACAGTTACCGCAAAAAGCCTGATAGATCAGGCGTATAATCAGTAGGCGTGCAACTATTTTCTGACCCTGTCGGCATGTACCGGCCGGGCGCCCCCCAC TGCCGTGGTACGCACTGATGAGCAAACAGATTCCCGTTCAAGACGTCACCCCGCCTGCCAAGGGCGACACCAATAACAACGATCTCTACGCCAAGCGCGA GAAGATCTACACCCGGGCCTTCACCGGTATCTTCCGCCGACTGCGCATGGTGGGCGGTGCGGCGCTCTTCCTCCTCTACTTCGGTACCGTCTGGCTCAAC TGGAGCGGCCGCCAGGCCGTCTGGTGGGACCTACCCGAGCGCAAGTTCTATATCTTCGGCGCCACCTTCTGGCCGCAGGACTTCATGCTGCTGTCCTGGC
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Amino Acid Sequence |
>cytochrome CBB3
MTTFWSLYITALTLGTLLALTWLIFATRKGQRSSTTDETVGHSYDGIEEYDNPLPKWWFMLFVGTLVFAVGYLALYPGLGTWKGLMPGYQSADEFADKEK GWTGVHQWEKEMAKADEKYGPIFAKFAAMPIEEVAKDPQAVKMGGRLFASNCSICHGSDAKGAYGFPNLTDADWRWGGEPETIKTTIMAGRHAAMPAWGE VIGEEGVKNVAAFVLTQMDGRKLPEGAKADIEAGKQVFATTCVACHGPEGKGTPAMGAPDLTHPGAFIYGSSFAQLQQTIRYGRQGVMPAQQEHLGNDKV HLLAAYVYSLSHGEKSAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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