Strain | Pseudomonas aeruginosa BWHPSA001 genomic scaffold adges-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGAGAAACAGGTGATGCCGCCCTTTACCTGTTCGGCGATGGCCAGCTCCGTGCCGTCGCGGATGAAATCCTCGCTGACCCATTGGCCTTCGGCCGGCCA GATGTGGTCCTGCAGCCAGGTCATCAGCGGCAGGTCGTCGGCGAGACCGCGGAACAGACTCATTGCCGAATGGCCGTGGGCGTTGACCAGGCCGGGGGCG AGCAGCATGCCGGGCAATTCGCGGATTTCCGTGGCGCCATGGCGCATGGCCTGCTCGCGCGGCGCGACCAGGGCGATCTGGCCGTCGCGGATGCCCAGCG CGTGATCGCGCAGCACCACCCCGGCGGGCTCCACGGGGACGATCCAGGTCGGCAGCAGGAGGAGGTCGAAGGGGTTACGGACGTTGGGCATGGCGGCGCA TCCTGGGCGCAGAGCGGGAAGCCGGAAGTATACCCGAGCGTCCGCGGCTGGGGCTCGTTATAATCCGCAGCTTTTCCGTGATTCAGCGAGAGGTGTGTGC
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DNA Sequence for Gene |
>Q014_01851
ATGCGAGAGCGACTGCTGGCGGCCGAGCGGGTCAAGGCGATCGAGTGGCGGGACGGTACGCTGCGGTTGCTGGATCAGCGCCTGCTGCCCCAGGAGGAGG TCTGGCTCGAACATGAGTCGGCGGCCGAGGTGGCCAAGGCCATTCGCGATATGGTCGTGCGCGGCGCGCCGGCCATCGGCATCAGCGCCGCCTACGGCAT CGTCCTTGGCGCCCGCGCGCGCCTGGCGCAGGGCGGCGACTGGCGCGCCGCGCTGGAGGAGGACTTCCGCCTGCTGGCCGACTCGCGACCCACGGCGGTC AACCTGTTCTGGGCGCTGAACCGCATGCGCGACCGTCTGGAGCGAATGAAAGAGGGCGACCAGCCGCTGGCGGTGCTGGAAGCCGAGGCGATCTCCATCC ATGAAAGCGACCGCGAGGCCAACCTGACCATGGCCCAGTTGGGCATGGAGCTGATCCGCAAGCAGCAGGGCAGCCCGCAGAACATCCTCACCCACTGCAA TACCGGCGCCCTGGCGACCGGCGGGTTCGGCACCGCGCTGGGGGTGATCCGCGCCGCGCACCTGGAAGGCCTGGTCAATCGCATCTACGCCGACGAAACC CGGCCCTGGCTCCAGGGCTCGCGACTGACCGCCTGGGAGCTGGCCAACGAAGGCATCCCGGTCAGCCTGAACGTGGATTCGGCCGCCGCGCACCTGATGA AGACCGAAAACATCACCTGGGTCATCGTCGGCGCCGACCGCATCACCGCCAATGGCGATGTCGCCAACAAGATCGGCACCTACCAGTTGGCAGTCAACGC CATGCACCACGGCGTGCGCTTCATGGTGGTGGCGCCGAGTTCGACCATCGACATGAACCTGGAGAGCGGCGAGGACATCCCGATCGAAGAGCGCGACGGT CGCGAACTGCTGGAAATCGGCGGGCGACGGGTGGCGGCCGAGGTCGATGCCTACAATCCGGTATTCGACGTGACCCCGGCGGACCTTATCGATGCCATCG TGACCGAGCGTGGCGTCGTCGAGCGTCCCGACGCCGAGCGCATGGCCGCCCTGATGAGCCGCAAGCGCCTGCATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGAGGCGACTGGAGGTCGTCCCCGCCAGGGCCTTTGCCTTGGGCTGGGGCGTGGGCTGTGGTAAGCTCCGACGGTTATTCGAGCGCCCCGCGGAGGGGC CTCGAGAGTGCGCGAATCCTTGACTCAAGTCGTTGATTTGTAGTGAGTTGGCGCTGCTCGGGCATGCGCCGACCTACTTCGTTTGCCTCAGGATCGAGGC GGCGAAGTTCCACCAGAAAAAGGAACCAGGCTTCTCATGGGCGAACTGGCCAAAGAAATTCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTATC TCGACTACGCGATGAGCGTGATCGTCGGGCGGGCCCTGCCGGATGCACGTGACGGCCTGAAGCCGGTGCACCGCCGTGTGCTTTATGCCATGAGCGAGCT GGGCAACGACTGGAACAAGCCCTACAAGAAATCCGCCCGTGTGGTCGGCGATGTGATCGGTAAGTACCACCCGCACGGCGACATCGCGGTCTACGACACC
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Amino Acid Sequence |
>methylthioribose-1-phosphate isomerase
MRERLLAAERVKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGIVLGARARLAQGGDWRAALEEDFRLLADSRPTAV NLFWALNRMRDRLERMKEGDQPLAVLEAEAISIHESDREANLTMAQLGMELIRKQQGSPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADET RPWLQGSRLTAWELANEGIPVSLNVDSAAAHLMKTENITWVIVGADRITANGDVANKIGTYQLAVNAMHHGVRFMVVAPSSTIDMNLESGEDIPIEERDG RELLEIGGRRVAAEVDAYNPVFDVTPADLIDAIVTERGVVERPDAERMAALMSRKRLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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