Strain | Pseudomonas aeruginosa BWHPSA001 genomic scaffold adges-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAACAGGCGCTACCTGGCGACCAAGGCCGGCAAGCTCGGGCACATGCTCGGCAGCCTGCACCAGGGCGAGGCGGAAACCACGTGAGTCGCCAGCAAGCCC GCGGCGCGCTGGGACGTGCCTGGTGGTTGCAACTGGCGTTGGCGCTGTTGCCGCTGATCCTGGTCGAGTTCTTCCTCGGCGAACTGCAACCCCTTCCCCA TGGCCTGGCGATGCCGCTGTTCATCGCCGCGCTGCTGTCGATGTTCGTCAACCTGCCGCTGTTCGGTGCCTACAAGCGTGGTCTCATCGCCACCCAGAAA GCGCTGGATACGGCGGAGGAAGCCGCCGCCTGGACCCGTCTGGCGCAGGTGCGCCGCAAGGCCCTGTTCGGCGCCAGCCTGCCGGCCTGGATCGGCGTGC CGGGTGTGTTCGCCGGGCTCAACGGCGTTGCGCTGATCCTGCTCGGGGTCACCAGCCTGGTGCTGTTCTGGCTCTACCGTATTCCGCGTCAACTCGGTTG
|
|
DNA Sequence for Gene |
>Q014_00909
ATGCGCTCGTTCTGGCTGCTCGCCTGCCTGCTCCTCAGCCTTTCCGCCGGGGCGGCGCAGCGGGTGGTCAGCCTGGCGCCTTCGCTGACCGACAGCGTCC TCGAACTCGGCGCAGCGCGCCGCCTGGTCGGCGTGCTGGATGGCGGCGAGCGTCCGGCGGCGATTGGCGACCTGCCTTCCGTCGGTCGCTACGGCCAGGT CAATCTCGAACGCCTGCTGGAACTGCAGCCCGACCTGATCCTGGTCTGGCCCGGCAGCGTGCCCGAGGCGCAGTTGCAGCGCCTGCGGGACTTCGGCATC GCCCTCTTCATCGCCGAACCGCACAGCCTCGACGAACTGGCCCTGCAACTGGCTGCGCTGGGCGAGGCATTGGGCGAGGCCGAGGCCGGCCAGCGGTTGT CGGCCAGGTTCCGCGAAGGCATGCGGCGCCTGGCCGAGCGCTACCGGCGGGACAAGCCGCTGAAAGTGTTCTACCAGGTCTGGGACCGGCCGCTGTACAC CATTGGCGGACGCCAGGTGATCAGCGATGCGCTGCGCGTCTGCGGCGCCGAGAACCTATTCGGCGACCTGCCGCAGCCGGCGCCGCAGGTCAGCGTCGAG GCGGTTCTGGCGCGCGATCCGGCGGTCATCGTCGCCGGCAGTCACGCCCAGCTCGAACTCTGGCGGCAATGGCCGGCGCTGGCGGCGACGCGGCGCGGAC AGCTGTACCGGATCGAAGACAAGAACCTCGAGCGGCCGAGCTTCGCCATGCTGGCGGCGACCGAGAAACTCTGCCGCTCGCTCGCCGGGGCGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ATGCTTGCCGGTATCGCGCGCTGTATCGGCGGATAACGCCGGCGGCGTTGTTCGCCCTACGGGCAATTGGGGGGTAGGGCGAATAACCGCAACGCGGTTA TCGCTGCCAGTCGGCGGGGTATGTCGGTATGGTGGTGTATCGGCGGATAACGCCGGTGGCGTTATTCGCCCTACGGCAATTGGGGGGTAGGGCGAATAAC CGCAACGCGGTTATCCGCCGTTGTCGCTGGGTTTGGCGCTACTGCCGGTCGAGACGCTGGCGTACCGCCTTTTCGATGCCCGCGGCATCCAGGCCGCATT CGGCGAGCATCTCGCTGGGCTTGGCGTGTTCGACGTAGTAGTCGGGCAGGCCCAGTTGCAGCAGCGGGACTTCGAGGCCCTCGCTGGCGAGGAACTCGCC GACCGCCGAGCCGGCGCCGCCCATCACGGCGTTTTCCTCGATGGTCACCAGCAGTTCGTGGCTGCCCGCCAATTCGCGTACCAGGGCTTCGTCGAGGGGT
|
|
Amino Acid Sequence |
>iron-hydroxamate ABC transporter substrate-binding protein
MRSFWLLACLLLSLSAGAAQRVVSLAPSLTDSVLELGAARRLVGVLDGGERPAAIGDLPSVGRYGQVNLERLLELQPDLILVWPGSVPEAQLQRLRDFGI ALFIAEPHSLDELALQLAALGEALGEAEAGQRLSARFREGMRRLAERYRRDKPLKVFYQVWDRPLYTIGGRQVISDALRVCGAENLFGDLPQPAPQVSVE AVLARDPAVIVAGSHAQLELWRQWPALAATRRGQLYRIEDKNLERPSFAMLAATEKLCRSLAGAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|