Strain | Pseudomonas aeruginosa BWHPSA001 genomic scaffold adges-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATACCGCGCCGGCGCCACGGTTCTGGTTGAAGGCGTTGACCCGGAAACGCGCGACGCCCGGCACCTCGAAGGAGAAGTCGGTCTCGAGGAATTCCTCGAA GTCCTTGCGCTGCTTGTCGTTCATGATGTCGTAGATCAGCGCATGCACCTGCTTGTGTTCCAGCGGTGGCAGGTTGATCCGGCGTACATCGCCATCCACC CGGATCATGGGTGGCAGGCCGGCGGAGAGGTGCAGGTCCGAAGCGCCCTGTTTGGCACTGAAGGCGAGCAGCTCGGTAATATCCATGGGACTCCCCAATT ACAAGCAAGCAGGTAGAATGCCGCCAAAGCCGCCGTCTCGGACAAGGAAAACACCGGATGAGCCAGGGTGCTTCCAGGACACGCGTGGTGTCCTGCGCCA GACGCGGAACCTCGACACTGGAACAGGAAGATGGCCATCGAGGCCGGCGGTTTCGAGGGCGTCGAGCCGACGCCGACCGCACTTCCATAGGGCGCAGGTA
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DNA Sequence for Gene |
>Q014_00406
ATGTCCACGATAGCAGAGAATATTGCAAAGGTTGCCGCGCGCATCCGTGAGGCAGCGCAAGCTGCGGGGCGCGATCCGGCCACGGTCGGCCTGCTCGCCG TGAGCAAGGCCAAGCCCGCCGCCGCGGTGCGCGAGGCGCACGCCGCCGGCCTTCGCGACTTCGGCGAAAACTACCTGCAGGAGGCCCTCGGCAAGCAGGC CGAACTGGCCGACCTGCCCTTGAACTGGCACTTCATCGGCCCCATCCAGTCGAACAAGACGCGGCCCATCGCCGAGCATTTCCAGTGGGTGCACTCGGTG GACCGGTTGAAGATCGCGCAGCGCCTGTCGGAGCAACGCCCGGCCGGGCTGCCGCCCCTGAATGTCTGCCTGCAGGTCAACGTCAGCGGCGAAGCCAGCA AGTCCGGCTGCGCCCCCGAGGACCTACCGGCCCTGGCCGAGGCCGTGAAGCAACTGCCCAACCTCCGATTGCGTGGCCTGATGGCCATCCCCGAACCCAC CGCCGAACGCGCCGCGCAACACGCCGCGTTCGCCCGCCTGCGCGAACTGCTGCTGGACCTGAACCTTGGCCTGGACACCCTGTCCATGGGCATGAGCGAC GACCTCGAGGCAGCCATCGGCGAAGGTGCGACCTGGGTCCGCATCGGTACCGCCCTGTTCGGCGCCCGCGACTACGGCGCGCCGGCTTCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGGAATCCCCTATGAGCACACCCCGCATAGCGTTCATCGGCGCCGGCAACATGGCCGCCAGCCTGATCGGCGGCCTGCGCGCCCAAGGCGTGCCGGCGGC GCAGATCCGCGCCAGCGACCCGGGCGCCGAGCAACGCGCGAAGATCGCCGGCGAGTTCGCCATCGACGTGGTCGAGTCCAACGCCGAGGCCGTGGCCGAC GCCGACGTCGTGGTCCTGTCGGTCAAGCCGCAGGCCATGAAAGCCGTGTGCCAGGCCTTGGCGCCGGCGCTGAAGCCGGAGCAACTGATCGTCTCCATCG CCGCCGGCATCCCCTGCGCCAGCCTCGAAGCCTGGCTCGGCCAGCCGCGCCCGGTGGTCCGCTGCATGCCCAACACCCCGGCGCTGCTGCGCCAGGGCGC CAGCGGGCTGTACGCCAACGCGCAGGTCAGCGCCGCGCAACGCGAGCAGGCCGGGCAGTTGCTGTCCGCGGTGGGCATCGCCCTGTGGCTGGACGACGAA
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Amino Acid Sequence |
>UPF0001 protein
MSTIAENIAKVAARIREAAQAAGRDPATVGLLAVSKAKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPIAEHFQWVHSV DRLKIAQRLSEQRPAGLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVKQLPNLRLRGLMAIPEPTAERAAQHAAFARLRELLLDLNLGLDTLSMGMSD DLEAAIGEGATWVRIGTALFGARDYGAPAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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