Strain | Pseudomonas aeruginosa BWHPSA002 genomic scaffold adgeG-supercont1.4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTCGAAGCCGGCGATGAGGCGGAGGAGGGTGGTCTTGCCGCAGCCGGAAGGGCCGAGGAGGGTGAAGAATTCGTTGGCGTGGATATCCAGGGACACATCG TCAAGGGCCTTCAGGCCTTGGCCGGGGGTACCGAATTCCATGCAGATCCGCTCGATGGCTATCGCGCTGGTCATGCTGAATTCCATGCAGTCAAGCAGTT GTTATTGTTGAGGTTTTGCGGTTTCTGGGGCCCGCTTCACCTGCTGCGGTTCGATAATGACCGGGGCGCCGCGGGCGCAGAACGATAGATGCGGCCAATA AGGGATCGAACAGGCCAATCTGGTGGCGCTGGAAGAAGACTGCGGATGCTCTCTTGTCGTCTCTTCGGACAGGAAACTCGGACCTGTCCGAGTCGCCCGG GCGGCTGGCTGACTTTAAGCTTGGCTTCAGCCTGGAGCCGTAGCTTGCGTAGGAAAGGTCGGGCGCAGCCCGTTTCCATACAGCGTACAGGCTCTATGCT
|
|
DNA Sequence for Gene |
>Q015_05040
ATGACTATCCACGCCCAAACTCCCGAGCCGTTTTCCATGTCCCGAGCTTTCACGCCTCGCCGTCTGCTGCTGGCCGTCCTGCTGGTCGCGCTGGCCGCGC TGGTCCTTCTCGGCCAGAGCTTCCGGGTCTTCGACCGGGCCTGGTTCGCCGTCCAGGAGTGGCGTCACGCCGATGCCTGGAAAGAGCGCTCGATATGGCT GCCGGACTACCGCGTGCGGATCGAGGCGCAGCCCATCGAGGGGTTGAACGACGACGTTTCCGCGCTGACCTTCGATCCCGACCGGCGCACCCTGTTCACC GTGACCAACCAGCCGGCGCAGATCATCGAGCTGTCCTTGCAGGGCAAGGTACTGCGGACCATCCCGCTGACCGGCTTCGGCGACGCCGAGGCCATCGAGT ACATCAGCCGCGGCGTCTACGTGATCACCGACGAGCGCCAGCAACGCCTGGTCAAGGTGCGCCTGGAGGACGACACGCGCTTCATCGACGCTGCCGATGC CCAGCAGCTTTCGCTGGGTATCGGCCTCAACGGCAACAAGGGTTTCGAAGGGCTAGCTTACGACGCCGAGGGCAAGCGCCTGTTCGTCGCCAAGGAGCGT GACCCGGTGCGCATCTACGAGATCCACGGTTTCCCCCACACCCAGGCGGACAAACCGTTCGCCGTGCACGTGGTGGACGACCCCGGGCGCGACAAGCGCC TGTTCGTCCGCGACCTGTCCAGCCTGCAGTTCGACGAGGGCACCGGGCACCTGCTGGCGTTGTCCGACGAGTCGCGTCTGGTAGTCGAGCTGGACACCGA CGGCGAGCCGGTCAGCACCCTGTCGCTGCTGCGCGGCATGCACGGCCTGAAGCGCAGCGTGCCGCAGGCCGAGGGCGTGGCGATGGACGACCGTGGCGTG CTCTACCTGGTCAGCGAGCCGAACCTGTTCTACGTCTTCAGCAAGGACGAGCCGGCGCAGCCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CGCGGCCTACGGGGACGGCAGGAGCGTCCCCTGGCCCGCTCAGAACTGCCAGTTCACCCCGAGCGAATAGCCCGCCTGGTTGCCTTCGCTGTGGGCGAAG CGGCTGTTGGCTTCGGCGAAGACCCCGAGCTGCTCGGTGATCGCCAGTTGCGCGCCAAGCTGGGCGCGGCCAAAATCCTTGTCCACGCCGCCCATGTCGG CGACCCGGACACGCCCGTCGCCGCGGCTGGTCAGGTCCATGTCGTCCAGGCGTCCGTCCGCCAGCTCGCGGACCCAGCGCAGGCTGGCGTAGGGTTGCAG GCGCATTCTCGCGCCCAGCGCCAGCTCGCCGCGCAGGCGCCAGCCGAGACTTGCCTCCAGCGAGTCGTAGTCCTGCTTCTCGTAGCCGAGTGCGGTACGC AGGGCCTCGTCCTCGCGGAAGTCGTCGATGCGGTAGTGCATGTAGTCGAGGCCGGCCAGCGGCCCGCTCCGCAGTTCGCCGAAGCTGAAGTCATAGCCGC
|
|
Amino Acid Sequence |
>DNA-binding protein
MTIHAQTPEPFSMSRAFTPRRLLLAVLLVALAALVLLGQSFRVFDRAWFAVQEWRHADAWKERSIWLPDYRVRIEAQPIEGLNDDVSALTFDPDRRTLFT VTNQPAQIIELSLQGKVLRTIPLTGFGDAEAIEYISRGVYVITDERQQRLVKVRLEDDTRFIDAADAQQLSLGIGLNGNKGFEGLAYDAEGKRLFVAKER DPVRIYEIHGFPHTQADKPFAVHVVDDPGRDKRLFVRDLSSLQFDEGTGHLLALSDESRLVVELDTDGEPVSTLSLLRGMHGLKRSVPQAEGVAMDDRGV LYLVSEPNLFYVFSKDEPAQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|