Pseudomonas aeruginosa BWHPSA005, Q018_00574
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA005 genomic scaffold adgfj-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCTGAGCGTGGGAAGGCACTTATCAGGCACTTCCGAAGGCACTACCGGACGATATCGATTCCATTGCCAACGCGGTAACTTCGAAGTACCTAAACCT TCATGAAACTGCAACTTCCAACTCCATCGACAGCTCTGGAAGTACATCCTCGGTATTTTCCAAGCCCCTAACCAAAGTCTGGATCGTTTCGTCACAGGAA ACGCTGGAGCGCCTATTCCAGAGCGCTTCGAACAATCGGTAAAAATAAAATCAAAATAATCAGACGCAGTTCAAAAACAACCAGAACAGATAGTTTTTCC GCCTTTCCCAACATGCTCCTCTCGCCTTGACTCGTTCGATGCAGCGGATCGCCCATGCGTATTTCCGGCATTGTCCGAGGCCCATTCCCTGTTCGACGCG ATACCCGGCGCACCCATAACAATATGCCGCCCTCCACGGGCCGATAGCGCCAGTTGTGAGCCTGTCCACCACTGCATTTCCCTCACTGCAAGGAGAGAAC
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| DNA Sequence for Gene |
>Q018_00574
ATGAGTCGCTCACCCATCCCTCGCCACCGAGCGTTGCTGGCCGGTTTCTGCCTGGCTGGCGCGCTGTCCGCCCAGGCGGCCACCCAGGAAGAAATCCTCG ATGCGGCACTGGTCAGCGGGGATTCCTCGCAACTGACCGACAGCCACCTGGTCGCCCTGCGCCTGCAGCAGCAGGTCGAGCGCATCCGCCAGACCCGCAC CCAGTTGCTCGACGGTCTCTACCAGAACCTCAGCCAAGCCTATGATCCTGGCGCCGCCAGCATGTGGGTCCTGCCGGCCAACCCGGACAATACCCTGCCC TTCCTCATCGGCGACAAGGGGCGCGTGCTCGCCAGCCTGAGCCTGGAGGCCGGCGGCCGCGGGCTGGCCTATGGCACCAACGTGCTCACCCAGTTGAGCG GGGCCAATGCCGCCCACGCGCCGCTGCTGAAGCGGGCGGTGCAGTGGCTGGTGAACGGCGACCCGGGCGCGGCCACTGCGAAGGACTTCAAGGTCAGCGT GGTCGGGGTGGACAAGACCGCCGCCCTCAACGGCCTGAAGAGCGCCGGCCTGCAACCGGCGGACGCCGCCTGCAACGCGCTGACCGACGCCAGTTGCGCC AGCACCAGCAAATTGCTGGTACTGGGCAACGGCGCCAGCGCCGCTAGCCTGAGCGCCACGGTGCGCGCACGGCTACAGGCCGGGCTGCCGATCCTCTTCG TGCACACCAATGGCTGGAACCAGAGCAACACCGGCCAGCAGATCCTCGCCGGCCTGGGCCTGCAGGAAGGCCCCTACGGCGGTAACTACTGGGACAAGGA CAGGGTGCCATCCAGCCGCACCCGGACGCGTTCGGTCGAGCTGGGCGGCGCCTATGGCCAGGACCCGGCGCTGGTGCAGCAGATCGTCGACGGTAGCTGG CGCACGGACTACGACTGGTCGAAATGCACCTCCTACGTCGGTCGCACCACCTGCGACGACGTGCCGGGACTGAGCGACTTCAGCAAGCGCGTCGATGTAT TGAAAGGCGCCCTCGACGCCTACAACCAGAAGGCGCAGAACCTCTTCGCCCTGCCCGGCACCACCTCGCTGCGGCTCTGGCTGCTGTGGGCCGACGCGGT GCGGCAGAACATCCGCTACCCGATGGACAAGGCCGCCGACACGGCGCGCTTCCAGGAAACCTTCGTCGCCGACGCCATCGTCGGCTACGTGCGCGAGGCC GGCGCGGCGCAGAAGGAACTGGGCAGCTACGCCGGCCAGCGCCAACAGTCGATGCCGGTATCGGGCTCGGAGGAAACCCTGACCCTCACCTTGCCGTCGG CCCAGGGCTTCACCGCCATCGGCCGCATGGCGGCGCCGGGCAAGCGCCTGAGCATCCGCATCGAAGACGCTGGCCAGGCCAGCCTGGCGGTCGGCCTGAA CACCCAGCGCATCGGCTCGACGCGGCTGTGGAATACCCGCCAGTATGACCGCCCGCGCTTCCTCAAGAGCCCGGACATCAAGCTCCAGGCAAACCAGTCG GTGGCGCTGGTATCGCCCTACGGCGGCCTGTTGCAACTGGTCTACAGCGGCGCCACGCCGGGTCAGACGGTAACCGTCAAGGTAACCGGCGCGGCCAGCC AGCCGTTCCTCGACATCCAGCCGGGCGAGGACAGCAGCCAGGCGATTGCCGACTTCATCCAGGCGCTGGACGCCGACAAGGCCGACTGGCTGGAGATCCG CAGCGGCTCGGTGGAGGTCCACGCCAAGGTGGAGAAGGTCCGTGGCTCGATCGACAAGGACTATGGCGGCGACGTCCAGCGCTTCATCCGTGAGTTGAAC GAGGTGTTCATCGACGACGCCTACACCCTGGCCGGCTTCGCCATTCCCAACCAGGCGAAGACTCCGGCAATCCAGCAGGAATGCGCGGTGCGCGGCTGGG ACTGCGACAGCGAGACCCTGCACAAGCTGCCCGGCACCCAGCACATCAACGTCGACCAGTACGCCCAGTGCGGCGGCGGTTGCAGCGGCAACCCCTACGA CCAGACCTGGGGCCTGAACCCGCGTGGCTGGGGCGAAAGCCATGAGCTGGGCCACAACCTGCAAGTGAATCGACTGAAGGTCTACGGCGGGCGCTCGGGC GAGATCTCCAACCAGATATTCCCGTTGCACAAGGACTGGCGCGTGCTCCGCGAGTTCGGGCAGAACCTCGACGATACGCGGGTCAACTACCGCAACGCCT ACAACCTGATCGTCGCCGGACGCGCCGAGGCCGATCCGCTGGCAGGCGTATACAAGCGCCTGTGGGAAGACCCGGGCACCTACGCGCTGAACGGCGAGCG GATGGCCTTCTATACCCAGTGGGTGCACTACTGGGCCGACCTGAAGAACGATCCGCTGCAGGGTTGGGATATCTGGACCCTGCTCTACCTGCACCAGCGC CAGGTGGACAAGTCCGACTGGGACGCCAACAAGGCCGCTCTCGGCTACGGCACCTACGCCCAGCGCCCGGGAAACAGCGGCGATGCCAGCAGCACGGACG GCAACGACAACCTGTTGCTCGGCCTGTCCTGGCTGACCCAGCGCGACCAGCGGCCAACCTTCGCGCTATGGGGCATCCGTACCTCGGCAGCGGCCCAGGC GCAGGTGGCGGCCTACGGTTTCGCCGAGCAGCCGGCGTTCTTCTATGCCAACAACCGGACCAACGAATACAGCACGGTGAAGCTTCTGGACATGAGCCAG GGGTCGCCGGCGTGGCCGTTTCCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCGTAGCTGAGGGGGCTGGCGCGGGGTGATGCTTCTCGCTCCGCGCCGGTCCTCATGCCCCTCTCCCCGACGGGAGAGAGGGTCGGCCATGCCAGCGGG CAATGCCGTGCCAGGCTGGCAAGCCAAACTGTCGTTCAAGCTGAACGATCCTGCGCAATAATGAGCCCCTTCCACCAGCAAGGACCGCTCATGACCGACC GCCTTCCCTGCCGCGCCTGCGGCCATCTCATCCTCGCGACCACGGCGGCGAGGAACGACGGACTGTGCATGCCCTGCAAGGGCGGCTACCGGCAGAACAT CGAGGATGGCAAGCGTTTCCACACGGAGCGACGGCGCTACCTGGCGAGTCCGCAGGCGCTGTACTGGAGCGCGCTGGTGAATCGCGTCTACGATGGCCGC GAGGGATTCGCCGGGCTGTCGCCGGCCGAACGGAGCTACTACGCAGTGAGCGTGCTCAGCGGCGAAGTGCACAACGGCGGCTTCGACCAGTACTTCGGCA
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| Amino Acid Sequence |
>hypothetical protein
MSRSPIPRHRALLAGFCLAGALSAQAATQEEILDAALVSGDSSQLTDSHLVALRLQQQVERIRQTRTQLLDGLYQNLSQAYDPGAASMWVLPANPDNTLP FLIGDKGRVLASLSLEAGGRGLAYGTNVLTQLSGANAAHAPLLKRAVQWLVNGDPGAATAKDFKVSVVGVDKTAALNGLKSAGLQPADAACNALTDASCA STSKLLVLGNGASAASLSATVRARLQAGLPILFVHTNGWNQSNTGQQILAGLGLQEGPYGGNYWDKDRVPSSRTRTRSVELGGAYGQDPALVQQIVDGSW RTDYDWSKCTSYVGRTTCDDVPGLSDFSKRVDVLKGALDAYNQKAQNLFALPGTTSLRLWLLWADAVRQNIRYPMDKAADTARFQETFVADAIVGYVREA GAAQKELGSYAGQRQQSMPVSGSEETLTLTLPSAQGFTAIGRMAAPGKRLSIRIEDAGQASLAVGLNTQRIGSTRLWNTRQYDRPRFLKSPDIKLQANQS VALVSPYGGLLQLVYSGATPGQTVTVKVTGAASQPFLDIQPGEDSSQAIADFIQALDADKADWLEIRSGSVEVHAKVEKVRGSIDKDYGGDVQRFIRELN EVFIDDAYTLAGFAIPNQAKTPAIQQECAVRGWDCDSETLHKLPGTQHINVDQYAQCGGGCSGNPYDQTWGLNPRGWGESHELGHNLQVNRLKVYGGRSG EISNQIFPLHKDWRVLREFGQNLDDTRVNYRNAYNLIVAGRAEADPLAGVYKRLWEDPGTYALNGERMAFYTQWVHYWADLKNDPLQGWDIWTLLYLHQR QVDKSDWDANKAALGYGTYAQRPGNSGDASSTDGNDNLLLGLSWLTQRDQRPTFALWGIRTSAAAQAQVAAYGFAEQPAFFYANNRTNEYSTVKLLDMSQ GSPAWPFP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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