Strain | Pseudomonas aeruginosa BWHPSA006 genomic scaffold adhwj-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGCACCAGGGCCGACAAGCAGGAAGCCAGCGGCCACCGCGACGAATCCATGCTCGACATCTACGACCTGAGCGTCCCGAAGGTCGCCCCCTCCGCTCTC TGATCCCCCCGAAACCTGCGTAACAAGCGCGCCGGGCTCCGCAAGGAATCCGGCCGCCAGCGCTGCGATTGCGTAACAAGCCAGAACCTAAGTGACTGAC ACACAAGCCGAAAATGTTTTTCTTGTAATCAGTAGGTCCCGGGTTCGACTCCTGGTGCCGGCACCATGAATCCCGAAAAGCCCCGCCTCGCGCGGGGCTT TTTGTTTTATCCTGCTTCCTTTCTACCCAGTGATGGCACTTCGAATAGAATGCCGGGTCAGATGCACCTACCAGATCTGGGGTTGGCAGGATCGCCATTT TTCCCGTACTAATCGTCGTCTTCACGATCGATTGGTACACCTTGGCGGGACGTGTCGAAGCAGCCCTACGGACAACCACTGCTTGAACAAGGTATGACTC
|
|
DNA Sequence for Gene |
>Q019_05279
ATGACGATTCTCGTGACCGGCAGCGCCGGCTTCATCGGCGCCAATTTCGTGCTCGACTGGCTGGCCCTGCATGACGAGCCGGTGGTCAGCCTCGACAAGC TCACCTACGCCGGCAACCGGCAGAACCTCGCCAGCCTCGACGGCGACGCCCGGCACACCTTCGTCGCCGGCGATATCGGCGATAGCCAGCTGGTAGCCCG CCTGCTCGCCGAGCACCAGCCGCGGGCGATCCTCAACTTCGCCGCGGAATCCCATGTGGACCGCTCGATCCACGGCCCCGAGGACTTCATCCAGACCAAC ATCGTCGGCACCTTCCGCCTGCTGGAAGAAGTGCGCGCCTACTGGGGCGCGCTGGAGCCGGAAGCGAAGGCGGCATTCCGCTTCCTCCACGTCTCCACCG ACGAAGTCTATGGCTCGCTGGCACCGAGCGATCCGGCCTTCACCGAGAACAACCGCTACGAGCCGAACAGTCCCTACTCGGCGTCCAAGGCGGCCTCCGA CCACCTGGTGCGGGCCTATCACCACACCTACGGGCTGCCGGTGCTGACCACCAACTGCTCGAACAACTACGGCCCCTACCACTTCCCGGAAAAGCTCATC CCACTGGTGATCCACAACGCCCTGGCCGGCAAGCCGCTGCCGATCTACGGCGACGGCCAGCAGATCCGCGACTGGCTCTACGTCAAGGACCATTGCAGCG CCATCCGCCGGGTCCTCGAAGCCGGGCAACTGGGCGAGACCTACAATGTCGGCGGCTGGAACGAAAAGGCCAACCTCGACGTGGTCGAGACCCTCTGCGC CATCCTCGACCAGGAGCAGCCGCGCGCCGACGGCCGCAGCTATCGCGAGCAGATCACCTTCGTCAAGGATCGTCCGGGCCATGATCGCCGCTACGCCATC GATGCCACGCGCCTGGAGCGCGAGCTGGGCTGGAAGCCGGCGGAAACCTTCGAGACCGGCATCCGCAAGACCGTGCGCTGGTACCTGGACAACCAGGACT GGGTGGCCAACGTAACCAGCGGTGCCTACCGCGAGTGGGTGGGTAAGCAGTACGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACCGGATCCTTCTCCTCGGCGCCAACGGCCAGGTCGGCTGGGAGCTGCAGCGCGCCCTGGCGCCGCTGGGCGAACTGCTGGTCTGCGACCGCCGGCGCGC CGATCTCGCCGACCCCGAAGGCCTGGCGCGACTGGTTCGCGCCGAGCGGCCGCAGTTCATCGTCAACGCCGGCGCCTACACCGCGGTGGACAAGGCCGAG AGCGATGCCGACAACGCCCGCCTGATCAATGCCCGCGCCGTCGCGGTACTGGCCGAGGAGGCCGCGGCCTGCGGCGCCTGGCTGGTGCATTACTCCACCG ACTACGTGTTCGACGGCGCGGGCAGCGCGCCTTTCGCCGAGGACGCGCCGACCGGCCCGCTGAGCGTCTACGGGCAGACCAAGCTGGAAGGCGAGCAGGC CATCCGCGCCAGCGGCTGCCGCCACCTGATCTTCCGCACCAGTTGGGTCTACGCCGCGCGCGGCGGGAACTTCGCCAAGACCATGCTGCGCCTGGCCGGG
|
|
Amino Acid Sequence |
>dTDP-glucose 4,6-dehydratase
MTILVTGSAGFIGANFVLDWLALHDEPVVSLDKLTYAGNRQNLASLDGDARHTFVAGDIGDSQLVARLLAEHQPRAILNFAAESHVDRSIHGPEDFIQTN IVGTFRLLEEVRAYWGALEPEAKAAFRFLHVSTDEVYGSLAPSDPAFTENNRYEPNSPYSASKAASDHLVRAYHHTYGLPVLTTNCSNNYGPYHFPEKLI PLVIHNALAGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLEAGQLGETYNVGGWNEKANLDVVETLCAILDQEQPRADGRSYREQITFVKDRPGHDRRYAI DATRLERELGWKPAETFETGIRKTVRWYLDNQDWVANVTSGAYREWVGKQYA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|