Strain | Pseudomonas aeruginosa BWHPSA006 genomic scaffold adhwj-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTGCGATTGACCGCCAGCCAGCCGGAGACCGCTTCGCCGCCGGCTTCCTCGAAGCAGCGTTGGAGCAGCCGCGACTGCTCGCGACGCAGCGCCTTTTCCA ACCGCACGCCCTCGGCGGTGAGGCCGAGGAGGCGTTTGCGCTTGTCGTCGTCGGCGGTGGCGCTGCCGATCAGGTTCATCTCCAGCAACTGGCGCAGCGG GATGTTCAGCGCCTGCTTGGTCACGCCGAGCAGGGCCAGCAGTTCCTTCACGCTGAGGCCCGGATAGCGGGCGATGAAGAACAGCACGCGGTGGTGCACG CGACCCAGGCCGCGGCGGGCGAGCATCTCGTCAGGCTTGGTGGTGAAGGCCTGGTACGCGAAGAAGAAGGCTTCCATCATGGCCTGCTGCTGGACGGCGT GGTTTTTCAGGTCAGGCATATTGACGCTTCCGGGTGCGGCATCGTAGTTTCGGTCAAGCAGTTTGACTCATTTTTCCCCGCCTACGCTACCGGTGATCCC
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DNA Sequence for Gene |
>Q019_03651
ATGGCCTTCTCTGAACGCATCTCCCGCCTGAAAAGCTCCTTGATCCGCGAAATCCTTGCCGCGGCGCAGCGTCCGGAGGTGATGTCGTTCGCCGGCGGGC TGCCGGCCGAGCCGATGCTGCCGAAGGTGCAGTGGGAGCAGATGCCGGCCTCCATGGGCCAGTACGGCATGAGCGAAGGCGAGCCTGCCCTGCGCGAAGC CATCGCCGCCGAAGCGCGTGCCCTCGGCGTCCCCTGCGAGGCGAGCCAGGTGCTGATCGTCAGCGGTTCGCAGCAGACCCTCGACCTGGCCAGCAAGCTG TTCATCGATCCGGGCACCGAGGTGCTGCTCGAGGCGCCGACCTACCTCGCCGCGCTACAGGCCTTCCAATTGTTCGGCGCCGATTGCGTGACCGTGCCGC TGGGTGCCGAGGGCCCCGACCTGGTTGCCCTGCGGCAGCGCCTGGAGCGACACAAGCCGGCCTTCGCCTACCTGATCCCGACTTTCCAGAATCCGTCCGG CGTGCGCTACAGCGAGGAACGCCGCGACGCGGTGGCGGCGCTGCTCGACGAATTCGGCGTGACCCTGATCGAAGACGAACCCTATCGCGAACTGGTGTTC GACGAGGGCCGCGCAACCCCGCTGGTCAGCCGCCTGCGCAAGTCCAGCTGGATCTATACCGGCACGGTGTCGAAGACCCTGCTGCCGGGCCTGCGCGTCG GTTTCCTGATCGCCACCCCGGACCTGTTCCCGCACCTGCTGCGGCTGAAACAGTCGGCCGACCTGCATACCAACCGGGTAGGGCAGTGGCAGGCGCTGCA ATGGTTCGGCAGCGAGGCCTACCGCCAGCACCTGGCCGAGCTGCGCGAGTTCTACCGGGTCCGCCGCGACGCCATGCAGGAGGCCCTGCTGGAGCACTTC GGCGAGCTGGCCGAATGGAATATCCCGGAGGGCGGGCTGTTCTTCTGGCTGACCCTCAGGCAGCCGCTGGATACCCGCACCCTGCTCCAGCCGGCGCTGG CCGCCGATGTCGCATTCATGCCCGGCGAACCTTTCTTCGCCGAGCCGGAGCAGAACCTCGGGCGTCTGCGGCTGAACTTCAGCCACGTCGCCCCGGAGCG CCTGCACGAAGGCCTGCGGCGCCTGGCCAAGGTCGTCCGCGACGCCCAGGCCGCCGAAGCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCCTCATCGGCGCTCCTCCGAGGGCGCCGGCCATTCGATCCGAGGAGCGACACGATGTACAAGGTCTACGGTGATTACCGTTCGGGCAACTGCTACAAG ATCAAGCTGGCCATGTCGCTGCTCGGCATCGACTACCAGTGGGTTCCGGTGGACATTCTCAAGGGCGAGACCCAGACCCCGGAGTTCCTGGCGAAGAACC CCAACGGCAAGATACCGGTGCTGGAGCTGGAGGACGGCAGTTGCCTGTGGGAGTCCAACGCCATCCTCAACTTCCTCGCCGACGGCAGCACCCTGTTGCC CAGCGAACCGCGCCTGCGCACCCAGGTGCTGCAATGGCAATTCTTCGAGCAATACAGCCATGAGCCCTATGTGGCCGTGGCGCGCTTCATCAAGCTCTAC CTCGGCCTCCCGGAAGCCCGCCGCGCCGAGTTCGAAGAGAAGAAGATCGGCGGCTACAAGGCCCTCGACGTCATGGAGAAACAGCTGTCGCGCACGCCAT
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Amino Acid Sequence |
>GntR family transcriptional regulator
MAFSERISRLKSSLIREILAAAQRPEVMSFAGGLPAEPMLPKVQWEQMPASMGQYGMSEGEPALREAIAAEARALGVPCEASQVLIVSGSQQTLDLASKL FIDPGTEVLLEAPTYLAALQAFQLFGADCVTVPLGAEGPDLVALRQRLERHKPAFAYLIPTFQNPSGVRYSEERRDAVAALLDEFGVTLIEDEPYRELVF DEGRATPLVSRLRKSSWIYTGTVSKTLLPGLRVGFLIATPDLFPHLLRLKQSADLHTNRVGQWQALQWFGSEAYRQHLAELREFYRVRRDAMQEALLEHF GELAEWNIPEGGLFFWLTLRQPLDTRTLLQPALAADVAFMPGEPFFAEPEQNLGRLRLNFSHVAPERLHEGLRRLAKVVRDAQAAEAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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