Pseudomonas aeruginosa BWHPSA006, Q019_01871
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA006 genomic scaffold adhwj-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGGTCGCAACCCCAAGACCGGGGAGTCGGTACGCCTCGACGGCAAGTTCGTGCCGCACTTCAAGCCGGGCAAGGAGTTGCGGGATCGGGTCAACGAGCC GGAATAAGGCTGTTTAGAGGCTTGACCTGCTTGGTATGGAGGTATTCATGCGCACGCTTAAAAGAATGCTTGTTGGGCTACTGATAGTGGTTGTGGCCTT GTCGGCAATTATTTTTACTTTGGAAAATCGTGCTCTTATCCAATTTTCCTTCTTGGGGTGGGAGACGCCTGCGATTCCGAGTGCATTGTTATTTTCATTG GTGTTTGTTGCGGGCGGTCTGCTCGGTTGGTTTTTTGGAGTTTTTGCAGGCTTTGCGCATCATAAGTCGTCAAGACAACCTTCCGTGTAGAACTTGTCGG GGATCGTGGTGTCCAATATATCTTGTTGGGCTTTTCCCCTGATAGAGTTTCCGATTGGACTGATGATGGACTGAATGTGAATAAGCAGAATTCTTCTTTG
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| DNA Sequence for Gene |
>Q019_01871
ATGACGGCTGATGGTGAGGTTGACCTGGTGAAGCTGGTCAAGGAGCTTTGGGTTAACAAGGTTCTGATTCTTCTGACTACTCTTCTTGCATTAATCGGGT CTTTTACCTATGCGTATCTGAGTAAGCCTGTATATGAATATAGGGTTGCAGTAGTGCCTCCTGCTCTTGGGTCTATCGAAGGTTTCAATGTTGGTAGAAG GGAGAATGGCCTAGATGCATATACTGTTAGAAGTATCTATGCGATCTTTTCGCGCAATCTGCTTTCGGATGAGAATAAAAAAGAGTTCTTCTATAAGATA TACCTTCCCCAGGTGGGTGAGGGAGCGGAAAGCGAAGATGAGCAGGAGGAGTTTTATAAGAAGTTCTCCAAAGAGGTAAAGATTGATCCTGCTAACAAGC CAGATGCAGACCGTTATACGGTAATTGTGGAGGGCACGAAGCGAGAGGTTCTTGCTACATGGGCACAAGCTTTCGTGCGTTTGGCTGCGGATCGGGCCGT GCATGAGGTTATTGATAGTGCAGGTAGAGATTTCCAGGTAAGAAATGCTGCAATGCAGAGCCGCATAACCGTGCTGCAGAATATGGCGAAGGGCCGTCGT GATGATAGAATTGCACGTTTGAAGGAGGCATTGCTGATTGCGGAGTCGCTCAAGATAGATGGCCCGCCATTAATAGAAGGGGCGTCCGAGCAACAACTCT CCTCGATCATGGATGGTGACTTGATGTACATGCGAGGAGCTAAGGCGCTGCGCGCTGAAATCAACAATCTTGAGTCGCGTAGTGTAGATGCTCCATTCAT TCCTGAGTTGAGAACTCTCCAAGAGAAACTATCTTGGAACTCCAGTTTGTCTGTGGATTCTGATGCGGTGGCTGTCTACAAGGAAGACGAGGGACTCTCT TTTTCAAATCAACCCATTAAGCCGAAGAAGATTCTTATAGTTACTATAGGTACTTTGGCAGGATTGATAATTGGAATTCTACTCGCAGTGCTCGCTGGTT TTATAAGGAAGCTTCGTAGCGATGGCTCTCTTCGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTTTGATCTAAACCCTGATGCCACTTACTGGCATCAGGGTTTACTTGTTGTAGTTGTTGAATTGTATTAGGGGGTATCGAGTAGAATGTCAATAAGGCG GGGCGTTTTCTACTCCGGTATATCCATGGGCAGCAACTATCTTTTGCCTCTTGCTGCGATTCCTTTTCTCACGAGAACATTGTCAAGCGAAGCGTTTGGC CAATTGGTGATTGCCCAGGCCGTGGCTGTCATTCTATGTCAACTGGTAGACTTTGGATTTATTCTGGCAGGATCAAGAAAGGCTGCCATTATCGATAACA AAGTTGAACTGTCTAGTTTCTTTTCTGTTGTACAGAGTGCTAGATTCTTATTGTTGCTGCTTTCACTTTTAGTGCTGGCCATTTTGGCTGTATCTTCTAT TTTACCAATCCCCTTGCTTGTATTGGTTGCGGCTGCTCTTCCGGCAGTAGTTGGAAATTATCTTCAAGCAGTATGGTTCTTTCAGGGAAGAGCGCTGTTT
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| Amino Acid Sequence |
>O-antigen chain length regulator
MTADGEVDLVKLVKELWVNKVLILLTTLLALIGSFTYAYLSKPVYEYRVAVVPPALGSIEGFNVGRRENGLDAYTVRSIYAIFSRNLLSDENKKEFFYKI YLPQVGEGAESEDEQEEFYKKFSKEVKIDPANKPDADRYTVIVEGTKREVLATWAQAFVRLAADRAVHEVIDSAGRDFQVRNAAMQSRITVLQNMAKGRR DDRIARLKEALLIAESLKIDGPPLIEGASEQQLSSIMDGDLMYMRGAKALRAEINNLESRSVDAPFIPELRTLQEKLSWNSSLSVDSDAVAVYKEDEGLS FSNQPIKPKKILIVTIGTLAGLIIGILLAVLAGFIRKLRSDGSLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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