Pseudomonas aeruginosa PAO1, PA5410 (gbcA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCTTGACGCAGCGCACGAGGTGCCGGCCGTTGGCCCAGGTCTGGGTGGTGACCGGATTGAGGAAGTTGCTCGACATGATGATCTCTCCGTGCGCACGGGG CCGAACGATGGCCTGATGGGGCGGATTGTGCGCATCGCCGTGGCCGCTCATTTACCTGCCAGCGACATTTACATGCTTATCGCGACCTGCCTGCTGGGAC GCGGCCCGGAGCGTCGGAAACGGATGCGGTCATGTCGCCCATGGATAAGGTCGGCGGCGGGCGCGGGCCCACACTCCAGACCAGCCGAGACGAGGGTTTG CATGAACCCCGGGAGGGTAGAGCCCGGACGTGTAGAGCGACTGACCTTCATTCCCGCCACGGCGGGGCCCGTCCATCGGCAGGGCGGGATTCCGGACGCC GCGCCGGGATGAGGAAGGCTGTGAACGCCACCTTGCGTAGCAACCGTATCAGCCACTTTTTCCGCCGCCACCCGCGCGGGGGCGGCATGAGGAGTTACCG
|
|
| DNA Sequence for Gene |
>PA5410
|gbcA
ATGGACGTCACTTCCACCCTGAGTCTCGGCGATCCCCTGGAACCGGCCCGCAAGGCCACCGCCGACATGCTGCGCAGCCGCGACCACAGCTTCTCGCTGC CGCAGCCCTTCTACTGCGACCAGCGCCTGTTCGAGATCGACATGCAGGAGATCTTCCACAAGGAATGGCTGATCGCCGGCATGACCTGCGAGATTCCCGC CAAGGGCAATTTCCTCACCCTGCAGATCGGCAAGAACCCGGTCCTGGTGATCCGTGGCGCCGAAGGCCAGGTGCATGCCTTCCACAATGTCTGCCGGCAC CGCGGCTCGCGCCTGTGCGTGAGCGAGAAGGGCAAGGTGGCCAAGCTGGTCTGCCCCTACCACCAGTGGACCTACGAGCTGGATGGCCGCCTGCTGTTCG CCGGCACCGAGATGGGCGCCGACTTCGACATGAAGGAGTACGGCCTGAAGCCGATCCAGGTGAAGACCGCCGGCGGCTACATCTTCATCAGCCTGGCGGA GAACCCGCCGGCCATCGACGACTTCCTGGCGACGCTCGAGCACTACATGGAGCCGTACGACATGGAGAACGCCAAGGTGGCGGTGCAGACCACCATCCGC GAAGCCGCCAACTGGAAGCTGGTGATCGAGAACAACCGCGAGTGCTACCACTGCAACGGCTCCCACCCGGAACTGCTGAAGACCCTGCTGGAGTGGGACG ACGTCACCGACCCGCGCGCCAGCCAGGCGTTCAAGGACCAGGTGGCGGCCTGCACCAGCGCCTGGGACGCCGAGAAGATCCCGTACGCCCACGCCAGCTT CGGCCTGCGCAATCGCATCGTGCGCATGCCGCTGCTGGACGGCACCGTGTCGATGACCATGGACGGCAAGCAGGGCAGCAAGAAGCTCATGGGCCGGATC AAGAACCCCGACCTCGGCTCGATGCGCATCCTGCACCTGCCGCACTCCTGGAACCACTGCATGGGCGACCACTTGATCGTCTTCACCGTGTGGCCGATCA GCGCCCAGGAAACCCTGGTCACCACCAAATGGCTGGTGCACAAGGACGCGGTGGAAGGCGTCGACTACGACGTGGCGCGCCTGCGCGAGGTATGGGACGC GACCAACGACCAGGATCGCCGGCTGGCCGAGGAGAACCAGCGCGGGATCAACTCCGACGCCTACCAGCCTGGTCCATACTCGAAGACCTACGAGTTCGGC GTGATCAATTTCCTCGACTGGTACAGCGAGCGCATGCTGAACAACCTCGGCGAGGAGTCCGCCCACGTGCGCAAGGTGGCCGGCAGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCGGACGAGGCGCCCCCTGGCGGGGCGCCGCTGCGGAGGAAAGGTCATGGACAACCTGCTGTTCTACGTCAGTTCCGCTTTCGTCAGCCTGCTGCTGGC CTGGAACCTGTTCGCCTGCTGGCGCCGCCAGCGGCCGCCGGAGAAGTCCCGGCCCTGAGCCCGCGCGCACGCCTTGCCTCCCGCCTCCGCCCCCTGACAG CCTCCCGGCAAAAGGACTAAGGTGGGAGGACTCAACCTGAACGGGCCGCTCAAGGGCGGCCTCTGGAGGCAAGCGTGGAAAACAATCCCCTGTGGGCCGA ACTGGGCAAGCACTGGAAACTGGTGGCCCTGCGCGGCGTGGCGGCGCTGGTGTTCGGCGTCCTGACCCTGCTCTCGCCGGCCCTGGCGCTGACCGTGCTG GTGCTGTTCTGGGGTGCCTACGCGCTGGTGGACGGAGCGTTCGCCCTGATCGCCGCGTTCAACATGCGCAGCGATGGGCAGTTCAACTGGCCGCTGGCGC
|
|
| Amino Acid Sequence |
>GbcA
MDVTSTLSLGDPLEPARKATADMLRSRDHSFSLPQPFYCDQRLFEIDMQEIFHKEWLIAGMTCEIPAKGNFLTLQIGKNPVLVIRGAEGQVHAFHNVCRH RGSRLCVSEKGKVAKLVCPYHQWTYELDGRLLFAGTEMGADFDMKEYGLKPIQVKTAGGYIFISLAENPPAIDDFLATLEHYMEPYDMENAKVAVQTTIR EAANWKLVIENNRECYHCNGSHPELLKTLLEWDDVTDPRASQAFKDQVAACTSAWDAEKIPYAHASFGLRNRIVRMPLLDGTVSMTMDGKQGSKKLMGRI KNPDLGSMRILHLPHSWNHCMGDHLIVFTVWPISAQETLVTTKWLVHKDAVEGVDYDVARLREVWDATNDQDRRLAEENQRGINSDAYQPGPYSKTYEFG VINFLDWYSERMLNNLGEESAHVRKVAGS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|