Strain | Pseudomonas aeruginosa BWHPSA007 genomic scaffold adgeP-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACGAAACCTACCTGAGAGTCGACCGGCTGGATGATGCCCTGGAGGTCAAGAAGCCCCAGGCCTACCTGTTCCGTATTGCCCTGAACATTGCCGCCGACCG CCGCGAGGGCGACGCCCGCCTGCTCACCGGGGAGGAGGTGGCGGAGCTGTTGCAGGTGGCCGACGAAGGCCTCGACCCGGAGCGCATCGTCGGCGGTCAC GCCGAGATCCGTCGCCTGCTGGAGGCGCTCTGCGAACTGCCGGCGCGGCGCCGGCAGATTCTCATCGCCTCGCGCCTGGAGGAGACGCCGCATGCGGAAA TCTCCCGTCGCTTCGGCATTTCCACCCGCACCGTGGAGAAGGAACTCAAGGCCGCCCTGTGGTTCTGCGCGGAGCGCCTGGAAAGAAAAGTCATCCAGAG GTTCGGTCCCGGGGCCGGAAAACCGTCATAAGCATAAGCAGGTGGAAAACCGCCGCCATATCCATCCCATGAGCCATTCCGGTGTCCGTACAGCACAGTC
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DNA Sequence for Gene |
>Q020_02013
ATGACAGCCTCAGACTCCGCCGCCGATGAAACCGGCGACCTTCGCCACGAAGCGCACGCCTGGGTGATCAGCCTGACCTCCGGACGCGTCACCCAGGGCG ACGCGCGGGCCTTCCGCCAGTGGTGTGCGCGCAGCCCGCAACACCTGCGAGCGTTCGTCGAGGCGCGCGATCTCTGGCAGGCACTCGGCAGTGCCGCCGC TCTGCCGCTGGAGCCGCCGGCCGTGGCGCAGATCGCGCCGAGGCGTTTCGGTCGTCGCTGGTTCGTCGGCGGTGCGCTGGCCGCCTCGGTGGCGTTGTTC GTCTTGCGCCCGTCGCTGCTCGACCATGGCCTGGGCGGCGCCGACTACGTCACGGCGGTCGGCGAGCAACGCCAGGTGCAGGTGAGCGGCGAGACGCGGA TCGAGATGAACACCCGCACCCGCCTGAACGTGCGGCGCAATCAAGAGCAGCAGGAAACCATCGAACTGCTCGGCGGCGAGGCCGAGATCATCGCCAGCCA CCCGCCGCAGAGCAGCCTGCGGGTGATGGCCGGGAGCGCCTGGCTGAGCGCCAGCCGGGCCCGCTTCAATGTGCGCAGCAGCGGTGACGTTTGCGTGGTG ACCTGCCTGGAGGGCAGCGTGCGGCTCGAACACCTCGGCCAGCGCCTGGACCTCCAGGCCGGCCAGCAGCTGACCTTCGACGAGCGACGCAACGGTCCGC CGGTGCCTTTCGACGTTGCCGAGGTGATGGCCTGGCGCGAGCGCATGCTGGTGTTCAACGACGTACCGTTGGCCACGGTGATCGACGAAATCAACCGCTA CCGTCCCGGCATGCTCCTGCTGCTGGACAAGGCCCTTGGCCGACGCCGGGTCCAGGCCCGTTTCAGCCTCGACCAACTGGCCGACGTGGCGACCCTGATC CGCGATGCCTATGGCATCGAGGTCACCCGCCTGCCGGGTGGGGTGGTGCTGCTCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCACCGCTTCATTGCAGGGCCACCACCCGTCGATAGCGCTCCACGCCGTTGCGGGTGACCCGTGCCAGGCTGATCTCCAGTCCGCTGGCGCGGACTTTG CTGCGTGCCGGCAGGCGCGTCCAGCCCTTTCCCGGCACCCAGGCACGGATCTCGAACCGACTCACGTCGTCCAGCACAGCCACCCGCTCCGCCAGCGGCG GCAACGGCAGGCGGTCGCCGCTGGGCGAGGCGGCGCGGTAGAGGACCTTGCCCTGTCGCCACCAGCGCACGCGCTGCAGCGGCGCGCCTGGCTCGGTACT GGCGCGGACGATGTCCAGGCGCAATGGGATCTCGCTCAGGCGCTTCAGTGCGAGTCCGGGCGGCAGGCTGTCGCCGGCCCGGATCGGCTCGTCGCCGCTG GGCAGGCCGGTCTCCTCCCGGATGGCGCTGTGCAGGGCGATGTCGCGCTCCAGTTGGTTCAGCGCGCGCAGTAGCGCGGCGCCCTGCTCGGTGCTGTCCT
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Amino Acid Sequence |
>iron dicitrate transporter FecR
MTASDSAADETGDLRHEAHAWVISLTSGRVTQGDARAFRQWCARSPQHLRAFVEARDLWQALGSAAALPLEPPAVAQIAPRRFGRRWFVGGALAASVALF VLRPSLLDHGLGGADYVTAVGEQRQVQVSGETRIEMNTRTRLNVRRNQEQQETIELLGGEAEIIASHPPQSSLRVMAGSAWLSASRARFNVRSSGDVCVV TCLEGSVRLEHLGQRLDLQAGQQLTFDERRNGPPVPFDVAEVMAWRERMLVFNDVPLATVIDEINRYRPGMLLLLDKALGRRRVQARFSLDQLADVATLI RDAYGIEVTRLPGGVVLLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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