Strain | Pseudomonas aeruginosa BWHPSA007 genomic scaffold adgeP-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGAGTACGCCCTGCACCAGGCGCTCGGGGACTTCCTCGAAGGCCGCACCACATTGATCGTGGCCCATCGGCTGTCGGCGGTGAAGCAGGCCGACCGGGT CCTGGTCTTCGATGGCGGGCATATCGCCGAAGACGGCGATCACCAGCAACTGATCGCCGAAGGCGGCCTCTACGCCCGGCTCTACGGACATCTGCAACAG ATGTGAGGCGCCAGGCTGTCGCCTGGCGGTTTTTCTCGTATATTCCATATAAGACATCCGGTTTTTATTGGCTGCGGCAATAAAAAACGCTGTCTGTTCC GCCAGGTGCAGGGCAGGTTCGGCAAACAGCCACTAGACTCCTACTGTTTGCCAGGTGTCCGCCTCCTCCAGCGTCGTGGCTGCCGGCAGGCAAGGCCTCG GGAGTTCTGCGACGGGATCTTGAGCGGCCGACAGGTGATGCAGTCAGGGGCGACGGAGACGGCGCCCGATCGCTTAGCGCCAGTTTGAATGGTAGATGGA
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DNA Sequence for Gene |
>Q020_01771
ATGAGGCAGAACCGGACTCTCGACAAGCCCCGCCTGCTCGGCCTGGTATGGCCCTTCATCGTCGTGGTGCTGCTGCAGGCCATGCTGGCGGGCGGCAGTC TCTACGTCCTCTCCGCGGTGCGCAGCTATGTCGGCGGCGAAAGCCTCTGGTCGAAGGGCCAGAAGGATGCCATCTACTACCTCACCCTCTATGCCGACTC ACGCGCCGACGAAGACTTCCGCCGCTACGAGGAGGCCATCGCGATCCCCCTCGGCGACCGCGAGATGCGCCTTGCCCTGGACCAGCCCGACCCGGACATC GAGGCGGCCCGCCAGGGCATCCTCAAGGGCGGCAACCATGCCGACGACGTTACCGCGATCATCTGGCTGTACCGCAACTTCCACGACTTCAGTTACTTCG AGCGCGCCATCGAGCTGTGGCTGGTGGGCGACAAGTACGTCATGGAACTGATCGACGTCGCCGGCAAGATGCGCGCGGGCATCGGCACCGGGCAGGCCAG TGCCGAGCAGGTGCAACAGTGGAAGACCGAGATCCATGCGATCAACGAGAAGGTCACGCCGGCGGCCAAGGCCTTCAGCGACGCCCTCGGCGAGGGCTCG CGGGCCTTGCTCAGGCTGCTGCTGGTGGCCAACCTGACCACCGCCAGCGTGCTCATCCTCCTGGCGTTCCTGCGGACTCGGCAGCAACTGATGCAGCGCC AGGAAGTGGAGAACGCCCTCGATGCCGAGCGCGAACGGGCCCAGATCACCCTGGCCTCGATCGGCGACGGAGTGATCACCGCCGACACCCAGGGGGGCAT TTCCTACCTCAACCCGGCCGCCGAGCAGATGACCAACTGGACGCTGGACAAGGCCCGCGGCCTGCCCCTGGCGTCGCTGTTCCGGATCGTCGACGAAAGC TCGCGGGAGGAGGGCATGCTGCTGATCGAGCAGATCCTCAGCGGCGAGATCGACGGCGGTCGCGAGCATTCCAAGCTGGTTCTGCGTCACGACGGCAGCA GCGTGCCGGTGACCCTGGTGGGCGCGCCGATCCACCGTGGCGCCGAGATCACCGGGGTGGTCCTGGTGCTTCACGACATGACCCGCGAGCGCCAGTACAT GGCGCGCCTGTCCTGGCAGGCGACCCACGATGCGTTGACCGGGCTGACCAACCGCCGCGAGTTCGAGTATCGCCTGCAGATAGCGCTGGAACGCCTGGAG CGCAACAGCGGGCGGCACGCCCTGATGTTCCTCGACCTGGACCAGTTCAAGCTGGTCAACGACACCTGCGGCCACGCCGCCGGCGACGAACTGCTACGCC AGGTCTGTACCCTGCTGCAACAAGGCTTGCGCGAGGGCGACACGCTGGCGCGGCTGGGCGGCGACGAGTTCGGCATCCTGCTGGAGAACTGTCCGGCGGA AAAAGCCGTGGAGATCGCCGACCATCTGCGCAAGACCATCCAGGACCTGCACTTCACCTGGAGCGGGCAGCCGTTCAACTGCACCGTCAGCGTTGGCCTG GTGCACCTGCTGCCGGGTATCTCGACCCTCGAGGAGGCGCTGCGCTCCGCCGACATGGCCTGCTACATGGCCAAGGAAAAGGGCCGCAACCGGGTCCAGG TGTTCCATCAGGACGACGTCGAACTATCGATGCGCTTCGGCGAGATGACCTGGGTCCAGCGCATCCACCTGGCGCTGGAGGAAGACCGCTTCAGTCTCTA TGCCCAGCCCATCGTGCCGCTGGGCGAAGGTGCGGAGGAGGGCTTGCACGTCGAACTGCTGCTGCGCCTGCGCGACGAGGGCGGGCGCCTGGTGCCGCCG CTGAGCTTCATACCCGCCGCCGAGCGCTACGGCCTGATGACGCTGATCGATCGCTGGGTGGTGGAGAATGCCTTCCGCACCCTTGTCGAGCGGGCCCAGG ACCCTCGCGCCGAGCCGATCGGCACCTGCGCCATCAACCTCTCCGGCGCGACCATCGGCGACGAGTCGTTCCTGCAGTTCCTCACCGAGCTGTTCGCCCG TTACCGCATTCCGCCGCAGACGATCTGCTTCGAGGTCACCGAAACCGTGGCGGTTGCCAACCTGGCCAGCGCCATCCGCTTCATCAACGAGCTCAAGGAC ACCGGTTGTCGTTTCTCCCTGGACGATTTCTGCGCCGGCATGTCGTCCTTCATCTACCTCAAGCACCTGCCGGTGGATTACCTGAAGATCGATGGCAGCT TCGTCAAGGACATGCTCGAGGATCCCATCGATCGCGCCATGGTCCAGGTGATCAACCATATCGGCCACGTGATGGGCAAACGTACCATCGCGGAGTTCGT CGAGACCGTCGAAGTCATGGAAGCGCTGCGCGAGATCGGCATCGACTATGCCCAGGGCCTGGCCATCGGCGCGCCCCTGCCGTTCAGTCGCCAGCCTCCG GGGGCTGGAGTGGATGCCCAGGGCCTGTGGCCGAGCCTGGGACAGAACCTCCGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGACCGCGGGGCGAAGAAAGAGTAGTTTCGCTGCTATGAGGCCGTTGCCGACAAGAAGAGAAGGGAGACGGGTGTGAGCGAGTTCTTTGACCGTACGGG CCCCTTGCAGGAGGCGGGAAGCTATCCGCAGTGGGCGCAGCAACTGATCGTCGACTGCCAGGCGAGCAAGGACCGGGTTTCCGGTCACGAGCTGTACCGG CGCATGCGCGACGCCGAACTGAGCCCGGCGCTGATGCGCCTGTACCTGATCGGCGGCTGGCCGGTGGTCGAGCAGTTCCCCTTGTACATGTCGCAGAACC TGCTGAAGACCCGTTTCGCCCGCCATCCCGGCGAAGACATGGCGCGCCGCTGGCTGATGCGCAACATTCGGGTCGAACTCAACCACGCCGACTACTGGCT GCACTGGGCCGAGGCCCACGGCGTGAGCCTGGCCGAGATCCAGGCGCAAGACGTGCCGGCCGAACTGCACGCGCTCAGCCACTGGTGCTGGCACACCTGC
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Amino Acid Sequence |
>membrane protein
MRQNRTLDKPRLLGLVWPFIVVVLLQAMLAGGSLYVLSAVRSYVGGESLWSKGQKDAIYYLTLYADSRADEDFRRYEEAIAIPLGDREMRLALDQPDPDI EAARQGILKGGNHADDVTAIIWLYRNFHDFSYFERAIELWLVGDKYVMELIDVAGKMRAGIGTGQASAEQVQQWKTEIHAINEKVTPAAKAFSDALGEGS RALLRLLLVANLTTASVLILLAFLRTRQQLMQRQEVENALDAERERAQITLASIGDGVITADTQGGISYLNPAAEQMTNWTLDKARGLPLASLFRIVDES SREEGMLLIEQILSGEIDGGREHSKLVLRHDGSSVPVTLVGAPIHRGAEITGVVLVLHDMTRERQYMARLSWQATHDALTGLTNRREFEYRLQIALERLE RNSGRHALMFLDLDQFKLVNDTCGHAAGDELLRQVCTLLQQGLREGDTLARLGGDEFGILLENCPAEKAVEIADHLRKTIQDLHFTWSGQPFNCTVSVGL VHLLPGISTLEEALRSADMACYMAKEKGRNRVQVFHQDDVELSMRFGEMTWVQRIHLALEEDRFSLYAQPIVPLGEGAEEGLHVELLLRLRDEGGRLVPP LSFIPAAERYGLMTLIDRWVVENAFRTLVERAQDPRAEPIGTCAINLSGATIGDESFLQFLTELFARYRIPPQTICFEVTETVAVANLASAIRFINELKD TGCRFSLDDFCAGMSSFIYLKHLPVDYLKIDGSFVKDMLEDPIDRAMVQVINHIGHVMGKRTIAEFVETVEVMEALREIGIDYAQGLAIGAPLPFSRQPP GAGVDAQGLWPSLGQNLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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