Strain | Pseudomonas aeruginosa BWHPSA007 genomic scaffold adgeP-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCCTGGAGCGCCGACGAACTGGCGCGCTTCACCCGCCTGGTACAGGATTCGGTGGGCTACGACGCCAGCCGCGGCGACAGCGTCAGCGTGATCAACGCGC CGTTCGCCCCGGCCCAGGCCGAAGAGATCGACAGCATTCCGTTCTACTCGCAGCCGTGGTTCTGGGACATCGTCAAGCAGGTGCTCGGCGTGCTGTTCAT CCTGGTCCTGGTGTTCGGCGTGCTGCGTCCGGTGCTGAGCAACATCACCGGCGGCGGCAAGGGCAAGTCGCTGGCCGGCGGCGGCGGTCGCGACGGTGAC CTGGCGCTGGGTGAGAGTGGCCTGGAAGGCTCGCTGGCCGACGACCGGGTGAGCATCGGCGGGCCGTCGAGCATCCTCCTGCCGAGCCCCACGGAGGGGT ATGATGCGCAATTGAACGCGATCAAGAACCTGGTCGCACAGGACCCGGGCCGCGTCGCCCAGGTCGTGAAAGAGTGGATCAACGCCGATGAGTAAGCGCC
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DNA Sequence for Gene |
>Q020_01518
ATGAGTGAGAATCGTCTCGCCGCCAAACTGACCAAGGTCGACAAGGCCGCCATCCTGCTCCTGTCGCTCGGCGAGACCGACGCGGCGCAGGTGCTGCGGC ACATGGGGCCGAAAGAGGTGCAGCGGGTCGGCGTGGCCATGGCGTCGATGCGCAACGTGCACCGCGAACAGGTCGAGCAGGTGATGGGCGAGTTCGTCGA AGTGGTCGGCGACCAGACCAGCCTCGGCGTCGGTGCCGACGGCTACATCCGCAAGATGCTCACCCAGGCCCTCGGCGAGGACAAGGCCAACAACCTGATC GACCGCATCCTCCTCGGCGGCAGCACCAGCGGCCTGGACAGCCTGAAGTGGATGGAGCCGCGTGCCGTGGCCGACGTGATCCGTTACGAACACCCGCAGA TCCAGGCCATCGTGGTCGCCTACCTCGATCCCGACCAGGCCGCCGAGGTGCTCAGCCATTTCGACCACAAGGTGCGCCTGGATATCGTCCTGCGCGTCTC CTCGCTGAACACCGTGCAGCCCTCGGCGCTGAAGGAACTCAACCTGATCCTGGAGAAGCAGTTCGCCGGCAATTCCAACGCCACCCGCACTACCATGGGC GGGGTCAAGCGCGCGGCGGACATCATGAACTACCTCGACAGCTCCATCGAAGGCCAACTGATGGATTCGATCCGTGAGGTCGACGAAGACCTGTCCGGAC AGATCGAGGACCTGATGTTCGTCTTCGACAACCTCGCCGACGTCGACGACCGCGGCATCCAGGCGCTGCTCCGGGAAGTCTCCTCGGACGTACTGGTGCT GGCGCTCAAAGGCTCCGACGAGGCGATCCGCGAGAAGGTCTTCAAGAACATGTCCAAGCGTGCCGCCGAGCTGCTGCGCGACGACCTGGAGGCCAAGGGG CCGGTACGGGTCAGCGAAGTGGAAGGTGCGCAGAAGGAAATCCTCACCATTGCCCGGCGCATGGCCGAGTCCGGCGATATCGTGCTGGGCGGCAAGGGTG GCGAGGAGATGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTGGTCCCCCACGACAAGGACAAAGACAGTCCCAGCGAACTGATCCGCGGCAAGGACGTGGCGGCCTTCGGCCTCTGGTCGTTGCCGAGCTTCGACGAG CCGCGCGACGAGCCGGCCGTTGCCGCGCCGCAGGTGCCCGCGGTCGCCGAACCCGCGCCGGCGCCGCCGGCGGTGGAAGAGGTCGAGCTGGAGACCGTCA AGCCGCCGACGCTGGAGGAAATCGAGGCGATCCGCCAGGACGCCTACAACGAAGGCTTCGCCACCGGCGAGCGCGACGGTTTCCACGCCGGCCAGTTGAA GGCGCGGCAGGAAGCCGAGGAGGCGCTGAAGGAGCGCCTGCAAAGTCTCGAGCGCCTGATGACGCAGCTCCTGGAACCCATCGCCGAGCAGGACGCCCTG ATCGAGCAGGGCATGGTCAACCTGGTCAACCACGTTGCCCGCCAGGTGATCCAGCGCGAACTGCACATGGACTCCAGCCATGTCCGCCAGGTCCTGCGCG
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Amino Acid Sequence |
>flagellar motor switch protein FliG
MSENRLAAKLTKVDKAAILLLSLGETDAAQVLRHMGPKEVQRVGVAMASMRNVHREQVEQVMGEFVEVVGDQTSLGVGADGYIRKMLTQALGEDKANNLI DRILLGGSTSGLDSLKWMEPRAVADVIRYEHPQIQAIVVAYLDPDQAAEVLSHFDHKVRLDIVLRVSSLNTVQPSALKELNLILEKQFAGNSNATRTTMG GVKRAADIMNYLDSSIEGQLMDSIREVDEDLSGQIEDLMFVFDNLADVDDRGIQALLREVSSDVLVLALKGSDEAIREKVFKNMSKRAAELLRDDLEAKG PVRVSEVEGAQKEILTIARRMAESGDIVLGGKGGEEMI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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