Pseudomonas aeruginosa PAO1, PA5330
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAGGCGGTGATCGACAGCGGAATCGACTTCGACGTCCTGTTCGGCCCGGCCTACAAGGGCATTCCCCTGGCCGCCACCACCGCGGTGGCCCTCGCCGAGC AGCACCAACGCGACCTGCCCTGGTGCTTCAACCGCAAGGAAGCCAAGGACCACGGCGAAGGCGGCACGCTGGTCGGCGCGCCGCTGAGCGGCCGGGTGCT GATCATCGACGACGTGATCACCGCCGGCACCGCGATCCGCGAAGTGATGCAGATCATCGACGCCCAGGGCGCCAGGGCGGCGGGCGTGCTGATCGCGCTG AACCGCCAGGAGCGTGGCAAGGGCGAGCTGTCGGCGATCCAGGAGGTCGAGCGCGACTTCGGCATGCCGGTGGTGAGCATCGTTTCCCTGGAGCAGGTGC TGGAATATCTTGCCGAAGATGCTGAACTGAAGAAGCATCTGCCGGCGGTAGAGGCCTATCGCGCCCAATACGGTATCTGAACCTTTCACAAGGGACTGGC
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| DNA Sequence for Gene |
>PA5330
ATGGTCGGACAGGATGTAATGCGTTGCCTGATGGCCCTGGGGCTGGTGCTCCAGGGGCTTTCCTTCGGCGCCCAGGCGGCGCCGGGCGGAGCGGTGGAGC TGTACCGCTACGTCAACGACAAGGGCGTGGTGGTGCTCGACCGCCAGGGTGTGCCGCCGCAGTACATCGGCAAGGGCTACCAGGTCCTCAACGACCAGGG CCGGGTTATCCGCACCGTACCGCCGGCGCCGACCGCCGAGGAACTGCGGCAGCGCAAGGCGGCCCAAGCCCAGGCCAGCTCCGATGCGCAGCTGCTGCGC CTGTATTCCAGCCTCGAGGACGTCGACCGCGCTCGCGAACGGCGCCTGGCGGAACTGGACGGGCTGAGCAGCGTGGCGCGCGGCAACCTGCAGTCGCTCA AGCTGCAACAGGCCAACCTGCAAGGCCAGGCGGCCAACCAGGAGCGTGCCGGACGTCCGGTGGCGCAGGCGCTGGTGGACCAGTTGGACGATCTCAAGCA GGAGGAAAAGCGCCTGCAGGGCGAGATCGGGCGTTTCCAGAAGGCCCGCGAAGACGCGGAAAGAACCTATGCCGCCGACCGCGCGCGGCTCTCCCAGCTA CTCGGCGTGAGTCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCCACTGGCGACTGTCGCTCGAACGCCCTGATCTTCTCGCGCAGCCAGTCCGGCAGGGGCTGGCTCTGTCGCTCGTTCGCATCCGCATAGACGTAGACC AGCTCGCCGACGGTGAGCAACTGCTCGTCGCGCCAGATGCCCAGCTCGAAAACCAGGCTGCTGCGCCCCAGCCGCGCCACGCGGGTGCCGATGTCCAGCC AGTCGTCGAAATGCGCCGGGGCGCGGTATTCCAGGGTGCTCTTCACCGCGAACAGGTCGCCTCCGCCGCGCAGCAGGTCGGCCGGGTAGGACATGCCGAG CTGGCGGTAGTACTCGGTGGTGGCGACGTCGAGATAGGTCAGGTAGTTGCCGTTGAAGACGATGCCCTGCGGATCGACCTCCGCCCAGCGAACCCGCAGG GAATGGAAGAAGGTGTAGTTCTGGCGCTGTGCTGCGCTGCTCATGCCGGCTCCTCGACGCTGCTGCAGACATCGACTCTAGACCGCCATCGCGCGGTGCG
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| Amino Acid Sequence |
>hypothetical protein
MVGQDVMRCLMALGLVLQGLSFGAQAAPGGAVELYRYVNDKGVVVLDRQGVPPQYIGKGYQVLNDQGRVIRTVPPAPTAEELRQRKAAQAQASSDAQLLR LYSSLEDVDRARERRLAELDGLSSVARGNLQSLKLQQANLQGQAANQERAGRPVAQALVDQLDDLKQEEKRLQGEIGRFQKAREDAERTYAADRARLSQL LGVSP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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