Strain | Pseudomonas aeruginosa BWHPSA008 genomic scaffold adgga-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGTGGCCATTGGCAGGCATTTAACGGAAAGGCCATCAAGTTGGTATCAAGTGATATCAAACGGATATTTCCAAATATTTCGCGAGCGGGACAAACGGCCG GAACTTCCCTCGCAGAGAAAACATCCTATCACCGCGATGCCTATCGATAGTTATGGGCAGAGCAACTTGAAACCGTCTCGAATAATCGGATTCCGCTCCG AGGGACAAACTCAACCTGTTGAAATTAAAGGCCTTTAGAAACTTGAATTCTATGGACCGAACTAAAACTAAGCATCCAAGGTCGGGTTATGCACCGTTAT TGAAACCCACCTGAAACATTAAAGGGCATGAACTTATAACTTGCCCCATTAGAGTGCCGAACAACTAAGCACTCTATTCGAAACTGCCTGAAGGCGGATC AAGGGCTCTGGATCGGGGCTCGTAGTAACGGCTCGCCAGATAGGGAAGTGGCCATACGGCCACCTCATTAACGGCGCGACAAACAATCGAGGTGAATGCG
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DNA Sequence for Gene |
>Q021_04730
ATGCGAATCAGCATCTTTGGTTTGGGCTATGTCGGTGCAGTATGTGCTGGCTGCCTGTCGGCACGCGGTCATGAAGTCATTGGTGTGGATGTCTCCAGCA CCAAGATCGACCTGATCAACCAGGGCAAGTCGCCCATCGTCGAACCGGGCCTGGAAGCGTTGTTGCAGCAAGGCCGGCAGACCGGACGGCTGTCGGGCAC CACCGACTTCAAGAAGGCTGTGCTGGACTCCGACGTATCGTTCATCTGCGTCGGCACGCCGAGCAAGAAGAACGGCGACCTGGACCTGGGCTACATCGAG ACCGTCTGCCGCGAGATCGGCTTCGCCATCCGCGAGAAGTCCGAACGCCACACCGTGGTGGTGCGCAGCACCGTACTGCCGGGCACCGTCAACAACGTGG TGATCCCGCTGATCGAGGACTGCTCGGGCAAGAAGGCCGGGGTCGACTTCGGCGTCGGCACCAACCCCGAATTCCTCCGCGAGAGCACCGCGATCAAGGA CTACGACTTCCCGCCGATGACCGTGATCGGCGAACTGGACAAGCAGACCGGCGACCTTCTCGAGGAAATCTACCGCGAGCTGGACGCGCCGATCATCCGC AAGACCGTCGAGGTCGCCGAGATGATCAAGTACACCTGCAACGTCTGGCACGCCGCCAAGGTCACCTTCGCCAACGAGATCGGCAACATCGCCAAGGCGG TCGGCGTCGACGGCCGCGAGGTGATGGACGTGATCTGCCAGGACCACAAGCTCAACCTGTCGCGCTACTACATGCGTCCCGGCTTCGCCTTCGGCGGCTC CTGCCTGCCCAAGGATGTACGCGCCCTCACCTATCGCGCCAGCCAGCTGGACGTCGAGCACCCGATGCTCGGTTCGTTGATGCGCAGCAACTCCAACCAG GTGCAGAAGGCCTTCGATCTCATCACCAGCCACGACACCCGCAAGGTCGGCCTGCTCGGCCTGTCGTTCAAGGCCGGCACCGACGATTTGCGCGAAAGCC CGCTGGTGGAGCTGGCCGAGATGCTCATCGGCAAGGGCTACGAGTTGCGCATCTTCGACCGCAACGTCGAATACGCGCGTGTCCACGGGGCCAACAAGGA ATACATCGAGTCGAAGATCCCGCACGTCTCCTCGCTGCTGGTCTCCGACCTCGACGAAGTGGTGGCGAGTTCCGATGTGCTGGTGCTGGGCAATGGCGAC GAGCTGTTCGTCGACCTGGTGAACAAGACCCCGAGCGGCAAGAAGCTGGTCGACCTGGTGGGCTTCATGCCGCACACCACCACTGCCCAGGCCGAGGGCA TCTGCTGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGGCCGCCCCCCTGGCCCCGTGAGCCGGTAAAGAACCTCTTTATCGCCCTCGGACCGAAGGCCGTCTCCGCGGCGTGCGCCATAACAACAACAAGCGCA CGCCGGCGTCGAGGCCAAGGTCCCCAGCCCGATGGAACTGATGATGGAAACTTACAAACGTGGCCTCGCCGAAGCCACCGGCTGGCTGGTGTTCCTCAGC CTGCTGATGGTGCTCGCGCTGGCAGTGCCGAAGACCGTGTTCGACGCCGACTCCAAGGATTTCATCCTGCTTATCGGCGCCGTCGGCATCTGGCGCTACT CCATGGGCGGCGTGCACTTCCTGCGCGGCATGCTGTTCCTCCACGTGGTCTACCCGTACTACCGCCGGCGCGTGCGCCAGTTGGGCAGCGCGGCCGACCC GTCGCACGTGTTCCTGATGGTCACCAGTTTCCGCATCGACGCCCTGACCACTGCCATGGTCTATCGCTCGGTGATCCGCGAAGCCATCGACAGCGGCTAC
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Amino Acid Sequence |
>GDP-mannose 6-dehydrogenase
MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIE TVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPIIR KTVEVAEMIKYTCNVWHAAKVTFANEIGNIAKAVGVDGREVMDVICQDHKLNLSRYYMRPGFAFGGSCLPKDVRALTYRASQLDVEHPMLGSLMRSNSNQ VQKAFDLITSHDTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASSDVLVLGNGD ELFVDLVNKTPSGKKLVDLVGFMPHTTTAQAEGICW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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