Strain | Pseudomonas aeruginosa BWHPSA008 genomic scaffold adgga-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACGAAACCTACCTGAGAGTCGACCGGCTGGATGATGCCCTGGAGGTCAAGAAGCCCCAGGCCTACCTGTTCCGTATTGCCCTGAACATTGCCGCCGACCG CCGCGAGGGCGACGCCCGCCTGCTCACCGGGGAGGAGGTGGCGGAGCTGTTGCAGGTGGCCGACGAAGGCCTCGACCCGGAGCGCATCGTCGGCGGTCAC GCCGAGATCCGTCGCCTGCTGGAGGCGCTCTGCGAACTGCCGGCGCGGCGTCGGCAGATTCTCATCGCCTCGCGCCTGGAGGAGACGCCGCATGCGGAAA TCTCCCGTCGCTTCGGCATTTCCACGCGCACCGTGGAGAAGGAACTCAAGGCCGCCCTGTGGTTCTGCGCGGAGCGCCTGGAAAGAAAAGTCATCCAGAG GTTCGGTCCCGGGGCCGGAAAACCGTCATAAGCATAAGCAGGTGGAAAACCGCCGCCATATCCCTCCCATGAGCCATTCCGGTGTCCGTACAGCACAGTC
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DNA Sequence for Gene |
>Q021_01848
ATGACAGCCTCAGACTCCGCCGCCGATGAAACCGGCGACCTTCGCCACGAAGCGCACGCCTGGGTGATCAGCCTGACCTCCGGACGCGTCACCCAGGGCG ACGCGCGGGCCTTCCGCCAGTGGTGTGCGCGCAGCCCGCAACACCTGCGAGCGTTCGTCGAGGCGCGCGATCTCTGGCAGGCACTCGGCAGTGCCGCCGC TCTGCCGCTGGAGTCGCCGGCCGTGGCGCAGATCGCGCCGAGGCGTTTCGGTCGTCGCTGGTTCGTCGGCGGTGCGCTGGCCGCCTCGGTGGCGTTGTTC GTCTTGCGCCCGTCGCTGCTCGACCATGGCCTGGGCGGCGCCGACTACGTCACGGCGGTCGGCGAGCAGCGCCAGGTGCAGGTGAGCGGCGAGACGCGGA TCGAGATGAACACCCGCACCCGCCTGAACGTGCGGCGCAATCAAGAGCAGCAGGAAACCATCGAACTGCTCGGCGGCGAGGCCGAGATCATCGCCAGCCA CCCGCCGCAGAGCAGCCTGCGGGTGATGGCCGGGAGCGCCTGGCTGAGCGCCAGCCGGGCCCGCTTCAACGTGCGCAGCAGCGGTGACGTTTGCGTGGTG ACCTGCCTGGAGGGCAGCGTGCGGCTCGAACACCTCGGCCAGCGCCTGGACCTCCAGGCCGGCCAGCAGCTGACCTTCGACGAGCGACGCAACGGTCCGC CGGTGCCTTTCGACGTTGCCGAGGTGATGGCCTGGCGCGAGCGCATGCTGGTGTTCAACGACGTACCGTTGGCCACGGTGATCGACGAAATCAACCGCTA CCGTCCCGGCATGCTCCTGCTGCTGGACAAGGCCCTTGGCCGACGCCGGGTCCAGGCCCGTTTCAGCCTCGATCAACTGGCCGACGTGGCGACCCTGATC CGCGATGCCTATGGCATCGAGGTCACCCGCCTGCCGGGCGGGGTGGTGCTGCTCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCACCGCTTCATTGCAGGGCCACCACCCGTCGATAGCGCTCCACGCCGTTGCGGGTGACCCGCGCCAGGCTGATCTCCAGTCCGCTGGCGCGGACTTTG CTGCGTGCCGGCAGGCGCGTCCAGCCCTTTCCCGGCACCCAGGCACGGATCTCGAACCGACTCACGTCGTCCAGCACAGCCACCCGCTCCGCCAGCGGCG GCAACGGCAGGCGGTCGCCGCTGGGCGAGGCGGCGCGGTAGAGGACCTTGCCCTGTCGCCACCAGCGCACGCGCTGCAGCGGCGCGCCTGGCTCGGTACT GGCGCGGACGATGTCCAGGCGCAATGGGATCTCGCTCAGGCGCTTCAGTGCGAGTCCGGGCGGCAGGCTGTCGCCGGCCCGGATCGGCTCGTCGCCGCTG GGCAGGCCGGTCTCCTCCCGGATGGCGCTGTGCAGGGCGATGTCGCGCTCCAGTTGGTTCAGCGCGCGCAGTAGCGCGGCGCCCTGCTCGGTGCTGTCCT
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Amino Acid Sequence |
>iron dicitrate transporter FecR
MTASDSAADETGDLRHEAHAWVISLTSGRVTQGDARAFRQWCARSPQHLRAFVEARDLWQALGSAAALPLESPAVAQIAPRRFGRRWFVGGALAASVALF VLRPSLLDHGLGGADYVTAVGEQRQVQVSGETRIEMNTRTRLNVRRNQEQQETIELLGGEAEIIASHPPQSSLRVMAGSAWLSASRARFNVRSSGDVCVV TCLEGSVRLEHLGQRLDLQAGQQLTFDERRNGPPVPFDVAEVMAWRERMLVFNDVPLATVIDEINRYRPGMLLLLDKALGRRRVQARFSLDQLADVATLI RDAYGIEVTRLPGGVVLLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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