Pseudomonas aeruginosa BWHPSA008, Q021_00977
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA008 genomic scaffold adgga-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GATGTCCTGGTCGTCGACACTGCCGCTGGGATCGGCGATTCGGTGGTCAGTTTCGTCCGCGCCGCGCAGGAGGTGCTGCTGGTCGTCTGCGACGAGCCGA CCTCGATCACCGATGCCTACGCCCTGATCAAACTGCTCAACCGCGACCACGGCATGACCCGCTTCCGGGTCCTGGCCAACATGGCCCACAGCCCGCAGGA AGGACGCAACCTGTTCGCCAAACTGACCAAGGTCACTGACCGTTTCCTCGACGTCGCACTACAGTATGTAGGTGTCATCCCTTACGACGAGTCGGTACGC AAGGCCGTGCAGAAACAGCGAGCCGTATACGAGGCATTCCCCCGCTCGAAGGCGTCCCTGGCCTTCAAGGCGGTCGCGCAGAAGGTCGATAGCTGGCCGC TGCCGGCCAACCCGCGCGGGCACCTGGAGTTCTTCGTCGAACGACTGGTCCAACACCCCGCGACAGGTTCGGCCGTATGACAGCGGCCTCTGGAGTGCGT
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| DNA Sequence for Gene |
>Q021_00977
ATGTATAGCAAGGCGCAAGCGCAGAACTCCCAGGAGCAACTGATCCAGCGTTACGCACCACTGGTCAAGCGCATCGCCTATCACCTGCTCGGCCGCCTGC CGGCCAGCGTGCAGGTGGAGGACCTGATGCAGGCCGGCATGATCGGCCTGCTCGAGGCCGCGAAGAAATACGACGCCGGCAAGGGCGCCAGCTTCGAGAC CTATGCCGGCATCCGCATCCGTGGGGCCATGCTCGACGAGGTCCGCAAGGGCGACTGGGCGCCGCGTTCGGTGCACCGCAACACGCGCATGGTGACCGAC GCGATCCGCGCGATCGAGGCGAGAACCGGACGCGACGCTAAAGATCACGAAGTTGCTGCCGAACTCCAATTGAGCCTCGAAGATTACTACGGCATCCTCA GCGACACGCAGGGCAGCCGCCTGTACAGCTTCGACGACCTGTTGCAGGACGGCGAACATGGATTGCCGGAAGACACCAGCCTCAGTCACAACGAACCGAT CCACGGCCTGCTCGACGAACGTTTCCAGGCGGCCCTGGCGGATGCCATCGCCAAGTTGCCGGAGCGCGAGCGCCTGGTGCTGGCGTTGTATTACGACGAG GAACTCAACCTCAAGGAGATCGGCGAGGTACTGGGCGTCAGCGAATCGCGGGTCAGCCAGTTGCACAGCCAGTGCGCCGCGCGTTTGCGCGCGCGCCTGG CCGATTGGCGGTCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCGGCCTCGACCGCAGCTTGTAACCGTTAACGCAAAAGAATGTGTGGCGCGTCCCCTGGGGCGCGCTCTGGTCTGTACGGAGGTTTACTTGGACAAGAA CATGAAAATTCTCATCGTGGATGACTTTTCCACGATGAGACGCATCATCAAGAACCTCTTGCGGGACTTGGGCTTCACCAATACCGCCGAGGCCGACGAC GGCACCACGGCGCTGCCGATGCTGCACAGCGGCAATTTCGACTTTCTCGTCACCGACTGGAACATGCCGGGCATGACCGGCATCGATCTGCTGCGCGCGG TTCGCGCCGACGAGCGCCTCAAGCACCTGCCGGTGCTGATGGTCACCGCCGAGGCCAAGCGCGACCAGATCATCGAAGCGGCCCAGGCCGGGGTCAACGG CTATGTGGTCAAACCCTTCACCGCTCAGGTCCTGAAGGAAAAGATCGAGAAGATTTTCGAGCGGGTCAACGGCTGAAGCCGGCCAAGAGGGTGTCATGGT
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| Amino Acid Sequence |
>RNA polymerase sigma 70
MYSKAQAQNSQEQLIQRYAPLVKRIAYHLLGRLPASVQVEDLMQAGMIGLLEAAKKYDAGKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVTD AIRAIEARTGRDAKDHEVAAELQLSLEDYYGILSDTQGSRLYSFDDLLQDGEHGLPEDTSLSHNEPIHGLLDERFQAALADAIAKLPERERLVLALYYDE ELNLKEIGEVLGVSESRVSQLHSQCAARLRARLADWRSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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