Pseudomonas aeruginosa BWHPSA008, Q021_00921
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA008 genomic scaffold adgga-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGCGAGCTGCGCCAGATCACCCACCAGGGGCCGATGCTGCTGCAGGCGCAGAAGAACGACATCCGCCTGGAAGCCGAGCAGAGCGTGGAGGTCAGCG CCAGCCAGCAGCACGTGCTGGTCACCGCGAAGGAGCACATCACCCTGATGTGCGGCGGCGCCTACCTGACCCTCAAGGGCGGCAACATCGAGCTGGGCAT GCCCGGCAACTTCGTGGTCAAGGCGGCGAAGCATAGTCATGTCGGTCCCGCTCATGCATCGACCAGCTTCAACGCCTGGGATTCGACACCGTTCGATGAC CGGTATGTCCTGCGCGACGAAGCCACGCTGGAGCCGTTACCCAATATCGCCGTTGAAGTGATACGAGGCGATGGTGGTGTGGTGAAACTGATGACCGACA GCCAGGGCCGTTTACCCAAGCAACAACACCTGGCCATGGACCCGGTGCAGATACGCATCCTGGGCAAGGGCAGTCACAACAGCGACACGGAGTCCAACAC
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| DNA Sequence for Gene |
>Q021_00921
ATGAGCAGCGAACCGCTCGAGCCGAATAATGATGTGATCATCCCTCGCTCTCGCGACAGGCTGGGACGGCCTGTCTACAAGGCGCAGTTGACCCGTACCG ACAACCAGAGCGAAAAGGTGGCGCTGGTTCGGCAGACCGCTCCCCTGCCGGTGATCTTCATTCCGGGGATCATGGGAACCAACCTGCGCAACAAGGCAGA TAAAAGCGAGGTCTGGAGGCCGCCGAATGGTCTGTGGCCTCTGGGAGACTTCGCTGCCTCGTTTGGTGCGTTGTGGACTTGGGCCTGGAGGGGCCCAAAG GTCCGTCAAAAACTTCTGAGATCCGAGAGAGTGGAAGTCGATGACCAAGGCACGATCGATGTCGGCCAGTCTGGCCTGGATGAAGAGGCTGCCCGCCTGC GCGGCTGGGGCAAGGTCATGCGCAGTGCGTACAACCCCGTCATGGGATTAATGGAGAGGCGACTGGATAACATCGTCAACCGTAGGGAACTCCAGGCATG GTGGAATGACGAAGCCCTCTCTTCTCCTGGAGATCAGGGTGAGGAGCAGGGAAAGGTGGGGCCGATCGATGAAGAGGAATTGCTCAAGGCCAGCCGATAC CAGTTCGACGTCTGGTGCGCCGGTTATAACTGGCTACAGTCCAACCGGCAGTCGGCGCTGGATGTACGCGACTACATCGAGAACACGGTGTGGCCCTTCT ACCAGAAGGAGTATGGTCTCGATCCCGAGCAAATGAGTCGTATGAAAGTCATTCTGGTCACCCACTCGATGGGAGGGCTGGTGGCGCGTGCCTTGACGCA GTTGCACGGCTATGAGCGCGTATTGGGGGTGGTGCATGGCGTGCAACCTGCGACGGGTTCCTCGACCATCTACCATCATATGCGTTGTGGCTATGAAGGT ATCGCACAGGTCGTGCTGGGACGAAATGCCGGTGAAGTGACAGCCGTTGTCGCCAACTCGGCCGGCGCGCTGGAGTTGGCCCCTAGCGCCGAATACCGGG AAGGACGTCCCTGGCTGTTTCTGTGCGACGCGCAAGGCCAGGTACTCAAGGATATTGATGGAAAGCCTCGGGCTTATCCGCAGAACCAGGATCCTTATGA AGAGATATACAAGAGCTCTACGTGGTATGGATTGGTGCCTGAACAAAATGCACAATATCTAGACTTATCAAACACTGAAAATAAAAAGAAAAATCCCAGG GTAATTTTTGAGAAGAAAATTGATGCTATTGCTGACTTTCATAATGAATTGGCTACGGCGGGCTACCACGTCGAAACCTATGTTCATTACGGTGCTGACG ATAGCCGCCATAGTTGGCGTGATTTGATCTGGAAAGGTGACCCGACCCCTCTGGAAACCCCTGGCGCCACACTCAACGACGATGAGAACGGCACTTACAA CAGTTGGTTCCGCCGGGGCTTGCCCACCATAGTGCAGGGTCCGCTGGAGGCGGGAAATCCACTGGACGCTTCCGGCAGCGGAGGTGACGAAACGGTACCG ACCGACTCCGGCCAGGCGCCTGCCCTGGCAGGTGTCAAGGCCAGCTTTCGGCATGGCAGCAAGGGCAAGGGACAGGCCAATACCAAACGGGGCTATGAGC ACCAGGAGAGTTACAACGATGCTCGTGCCCAATGGGCAGCGCTATATGGTGTGATCAAAATCACCCAGTTGGCGGATTGGCATCCTAATGACAAAGGAGG GACATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCATCCCCGTCGGTTGTTTGCTGTACTTGGGTTGGTGGTCTTGACCAGCATGACCAGTTGTACTTCGTTTTCTTCTTCTCGGAGCCCTTCCATGGACAA GACCGGATGGATCACTCATTGCTTTGGTCGCTTTCTGATTGATCTGCCGCCTGACGCGGTAATTAACGCCGGATACTATCTATGGGGCGACAACATCCAA CGGCTAGATGGCACACCTGCTGAGCTAGCAGCCAGGATTGCCCATCGCGAGCAAGAGTTACGGAATGGCATTCATAAAAAAACAAAGGAGAGCATGTTTG TTCGGAGGGTGGAAGACAAGGCTGGAGCCATTAGCCTGTGGTCTTGGGATTCGAATGCTAGTTTGCTTTCTTATAGGGTTGACTCATATTTTGTGGCTCA TCCCAAGGGAGAGGTTTTTCTATACTCAGGAGAAGTTACTCACGATAAAGAGAAGGAAGGGGAGGAAGCTATCAATGATATATCCCGAAGCCTTCGCTCT
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| Amino Acid Sequence |
>membrane protein
MSSEPLEPNNDVIIPRSRDRLGRPVYKAQLTRTDNQSEKVALVRQTAPLPVIFIPGIMGTNLRNKADKSEVWRPPNGLWPLGDFAASFGALWTWAWRGPK VRQKLLRSERVEVDDQGTIDVGQSGLDEEAARLRGWGKVMRSAYNPVMGLMERRLDNIVNRRELQAWWNDEALSSPGDQGEEQGKVGPIDEEELLKASRY QFDVWCAGYNWLQSNRQSALDVRDYIENTVWPFYQKEYGLDPEQMSRMKVILVTHSMGGLVARALTQLHGYERVLGVVHGVQPATGSSTIYHHMRCGYEG IAQVVLGRNAGEVTAVVANSAGALELAPSAEYREGRPWLFLCDAQGQVLKDIDGKPRAYPQNQDPYEEIYKSSTWYGLVPEQNAQYLDLSNTENKKKNPR VIFEKKIDAIADFHNELATAGYHVETYVHYGADDSRHSWRDLIWKGDPTPLETPGATLNDDENGTYNSWFRRGLPTIVQGPLEAGNPLDASGSGGDETVP TDSGQAPALAGVKASFRHGSKGKGQANTKRGYEHQESYNDARAQWAALYGVIKITQLADWHPNDKGGT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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