Strain | Pseudomonas aeruginosa BWHPSA008 genomic scaffold adgga-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCCGATCGGCCAGGTCACCGCCGATGGCAGCGGCAACTGGAGCTTCACGCCCGGCACGCCGCTGGCCAATGGCACGGTGGTCAATGCGGTGGCCCAGGA CGCCGCCGGCAACACCAGCGGTCCGGTCAGCACCACGGTGGACGCGGTGGCGCCGGCCGCGCCGGTGATCGACCCGAGCAACGGCAGCGTGATCGCCGGT ACCGCGGAAGCCGGTGCGACGGTGATCCTCACCGATGGCGGCGGCAACCCGATCGGCCAGGCCACCGCCGACGGCAGCGGCAACTGGACGTTCACCCCGA GCACCCCGCTGGCCAACGGCACCGTGATCAACGCCGTGGCCCAGGACCCGGCCGGCAATACCAGCGGTCCGGCCAGCGTCACCGTCGATGCCATCGCCCC NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
|
|
DNA Sequence for Gene |
>Q021_00538
GCCACGGTGATCCTCACCGACGGCAACGGCAACCCGATCGGCCAGGTCACCGCCGACGGCAGCGGCAACTGGAGCTTCACGCCCGGCACGCCGCTGGCCA ACGGCTCGGTGATCAATGCGCTGGCCCAGGACGCCGCCGGCAACACCAGCGGCCCGGCCAGCACCACGGTGGACTCGGTAGCCCCGGCCACCCCGGTGCT CGATCCGAGCAACGGTACGGTGATCAGCGGTACCGCCGAAGCCGGGGCCACGGTGATCCTCACCGACGGCGGCGGCAACCCGATAGGGCAGGCCACCGCC GATGGCAGCGGCAACTGGAGCTTCACTCCGGGCACACCGCTGACCAACGGCACGGTGATCAATGCGGTGGCCCAGGACGCCGCCGGCAACACCAGCGGTC CGGTCAGCACCACGGTGGACGCGGTGGCCCCGGCCACCCCGGTGATCGACCCGAGCAATGGTGTCGAACTCAGCGGCACCGCCGAACCCGGCGTCCGGGT GATCCTCACCGATGGCAATGGCAACCCGATCGGCCAGACCCTCGCCGACGGTAGCGGCAACTGGACCTTCACACCGGGCACGCCGCTGGCCAACGGCACG GTGGTCAACGCCGTGGCCCAGGACCCGGCCGGCAATACCAGCGGTCCGGCCAGCACCACGGTGGATACGGTGGCGCCGGCCACGCCGGTGATCAATGCCA GCAACGGCAGCGTGATCACCGGCACCGCCGAGGTCGGCGCCAAAGTGATCCTCACCGACGGCAACGGCAACCCGATCGGCGAGACCACCGCCGACGGCAG TGGCAACTGGACCTTCACCCCCGGCACGCCGCTGGCCAACGGTACGGTGATCAACGCCGTCGCCGAAGACGCCGCGGGCAACGCCAGCGGTCCGGCCAGC ACCACGGTGGACTCGGTGGCGCCGTCCGCTCCGCTGCTGAGCATCAGCGCCGACGGCGCGCTGCTGACCGGCACCGCCGAGCCGAACAGTCAGGTGCGTA TCGTGGTCAACGGCGACACCGCCAACCCGATCACGGTCACCGTCGACGGCGCCGGCAACTTCAGCCTGCCGTTCGCGCCGCCGCTGATCACCGGCGAACT GATCGCCGGGGTTGCCGTGGACGCCGCCGGCAACGTCAGCGGGCCGGCCACCATCAACGCGCCGGACCTGGCGCCGCCGACCATCAGCGTGCCGGAAGCC GCCGATACCTGGATCAACGCCGCGGAGATCGGCGACGGCATCCAGGTCGATGTGACGGTCCGTCCGACCATGCAGGTCGGCCAGGTGGTCACGGTCAAGT TCGCCGGGCAGAACGGCTACGAGGCCGAGGTCAGCCATACCCTCACCGCCGGCGACATCGCCGCCGGCAACCTGACCCTGACCCTGACGCCTCCCGGCGG CATGGGCCCGTTCCCGGAGGGCGCCTCGACCGTCACCGCCGACATCAACGGCGGCACCGCGTCGACCCCGGTGCCGTTCACCATCGACACCATTCCGCCG GCGACCCCGGTGCTGTCCCTGGTCGGCAACATCCTGACCATCTCGGCGGAGCCAGGGACCGAGTTGACGGTCACCGTCGACGTCGGCGGGGTGACCGCCA CCGCCACGGTGACCGCCGACAACAGCGGGCTGGCGTCGCTGAACCTGCTCACCGACCTGGACATCGACTTCAGTTGGGACCAGTTGCTCAATGCCCAGGT GTCGGTGGTCGGACGCGACCCGGCCGGCAACCCGAGCAACACGGCGAGCATCGGCGTCGGCACCAGCATCGAGCAACCGGTGACCATCGGCAACTTCGGC CTCGACGTCAGCCTCAACCCGCTGAACCCGCGTTTCGGTTTCAGCGGAACCACCGAGCCTGACTCCAGCGTGGTGATCCGGGTCATCACCCCGGCGTTGA ACGTCGAATTGCTGCCGATCCAGGCGGATTCGTCCGGAAACTTCTCGCTGAACCTGCTGAGCCCGACCATCCTCACCCAGTTGGGGCTGAACATCACCGA CATCCTCAACCTCGGCTCGCAGATCTCGTTCAACCTGGTGTCCACCGACTCCAATGGCAACGACAGCGCCGCCTACGGGATCACCCTGACCCCCAACGGA CTGTCGCTCAATATCGGCCAGATCGATGTCAACGGTACTTCCGGCGACGACGTGCTGTCCGGCGCCAACGGCAGTTCGGAGCACATCAACGGCGGCGACG GCAGCGACCTGATCTTCAACGTGGGCACCGGCGATCACGTGGTGGCCGGCAACGGCAACGACACCATCCAGATCACCGCGACCGATTTCGTCAGCATCGA TGGCGGCGCCGGGTTCGACACCCTGGTCCTGGCCAACGGCATCGACCTCGACTACAACGCCGTCGGCGTCGGCACGCTCAGCAACCTCGAGCGCATCGAC CTCGGCAAGGGCGACTCGGGTAGCGTGCTGACCCTGACCGCGGCGGAGGTGGATGCCATCACCGATGCCAACAACACGTTGCAGATCACCGGCGAGAACA ACGACACCCTGAACGTGGTGGGCGCGGTGAATACCGGTACCACGCAACTGATCAACGGCATTACCTACGACGTCTACACCTTCGGCAGTACCACCCTGCT GATCGAGGACAACACGGTACAGGTCGTGGTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TGCGCGGGCGCAGGCAGTACGCGCGCAAGGGACGGCGGCATGGGAAGGGAGCCATCTGGCTCCTTTCCCTGGGTCTGCCGATGTTCGCGTCGGCCATGCC CCTCGACCAGGCGGTCAGGGCAGGGCTGGCGATCCACCCGGAAGTACGATCCGCGATGGCCGAAGCGGACCGTGCAGGCACCGAGGTGGAGATGGCCAAA GGGGGGTACTACCCCTCCGTGACGATGTCCGGGGGGCCGCAGGAGTTCGACTTCGGCGAGATCGTCTACGATCTCACCGCGTCGCAGATGCTGTACGACT GGGGTCGGGTGACGAGCAAGGTCGACAGCGCCAGCGCGACCCAGCGCAAGCTGTCCGAGGCGGTGCTGGTGGCGCGCGACGATGCGGCGCTGGATATCGT CGAGACCTACCTCGACGTGCTTGCCTCGGAGCGCCGGGTGGAGGCGGTGCGCGAACACATCCAGCGCCTCGACGGCATCCGCGAGATGACCCAGGCGCGC
|
|
Amino Acid Sequence |
>hypothetical protein
ATVILTDGNGNPIGQVTADGSGNWSFTPGTPLANGSVINALAQDAAGNTSGPASTTVDSVAPATPVLDPSNGTVISGTAEAGATVILTDGGGNPIGQATA DGSGNWSFTPGTPLTNGTVINAVAQDAAGNTSGPVSTTVDAVAPATPVIDPSNGVELSGTAEPGVRVILTDGNGNPIGQTLADGSGNWTFTPGTPLANGT VVNAVAQDPAGNTSGPASTTVDTVAPATPVINASNGSVITGTAEVGAKVILTDGNGNPIGETTADGSGNWTFTPGTPLANGTVINAVAEDAAGNASGPAS TTVDSVAPSAPLLSISADGALLTGTAEPNSQVRIVVNGDTANPITVTVDGAGNFSLPFAPPLITGELIAGVAVDAAGNVSGPATINAPDLAPPTISVPEA ADTWINAAEIGDGIQVDVTVRPTMQVGQVVTVKFAGQNGYEAEVSHTLTAGDIAAGNLTLTLTPPGGMGPFPEGASTVTADINGGTASTPVPFTIDTIPP ATPVLSLVGNILTISAEPGTELTVTVDVGGVTATATVTADNSGLASLNLLTDLDIDFSWDQLLNAQVSVVGRDPAGNPSNTASIGVGTSIEQPVTIGNFG LDVSLNPLNPRFGFSGTTEPDSSVVIRVITPALNVELLPIQADSSGNFSLNLLSPTILTQLGLNITDILNLGSQISFNLVSTDSNGNDSAAYGITLTPNG LSLNIGQIDVNGTSGDDVLSGANGSSEHINGGDGSDLIFNVGTGDHVVAGNGNDTIQITATDFVSIDGGAGFDTLVLANGIDLDYNAVGVGTLSNLERID LGKGDSGSVLTLTAAEVDAITDANNTLQITGENNDTLNVVGAVNTGTTQLINGITYDVYTFGSTTLLIEDNTVQVVV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|