Pseudomonas aeruginosa PAO1, PA5253 (algP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
1698761 Reviewed by curator
Biological Process GO:0042121 alginic acid biosynthetic process
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
1698761 Reviewed by curator
Biological Process GO:1900190 regulation of single-species biofilm formation
NAS
Non-traceable Author Statement
ECO:0000303
non-traceable author statement used in manual assertion
1698761 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR44826 SPORE COAT PROTEIN SP85 - - 128 336 2.5E-21
MobiDBLite mobidb-lite consensus disorder prediction - - 329 352 -
NCBIfam NF038178 NCBIFAM: AlgP family protein N-terminal domain IPR047725 Transcriptional regulator AlgP, N-terminal domain 2 133 2.9E-65
Coils Coil Coil - - 34 68 -
MobiDBLite mobidb-lite consensus disorder prediction - - 128 352 -
Coils Coil Coil - - 74 94 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.