Strain | Pseudomonas aeruginosa BWHPSA009 genomic scaffold adggc-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAACTTTAGCCCTCCTTTCCGTTTTTATCTTTGTTATTGGAAATCAGTCATTTAGGCATTTCTCCGAATCCCCTTCGGAGAGCTACAGCCCAGGCTTCAC AAGGCCTGAACCGTTCCTAGGAATAACTCTACAACGATATTGAAGCGGTTAGAAACTGCACGTCACTGGTGCGTTCCACGCACTAATTGAGGTCCTCTTT TTCAATGAAAGTGCAGGACAGAGCGGTTTTTAAAATTAATATGAACATGAACTTCCTGGAATTCGGTACTTGGCGGAAAAAGTCGATTCGAATACGACAT GAACATATCCGTTAGCGACGCCACGTTCGGCGCAAAACCCTGTGACGGATTCGTCATAAGCCAGCGAATGCTCTATCGCGAGACTTGCCGGCAGTAATAA GCGTCGCCCGGCACTCCGGCAAGCGAGCTTTCCTCCCTACGTCATTCCGTTTATTCATATAACGCGTTCCGCCCGCTCCACCCGCGCCAGGAAACCCGCC
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DNA Sequence for Gene |
>Q022_05191
ATGCTGAACAAACGCCGCCTGCCGTCGATGACCGCCCTGCAATGCTTCGAAGCGGTAGCCCGGCACCTGAGCTTCACCCGCGCCGCCGAAGAGTTGAGCC TGACCCAGAGCGCCATGAGCAAGCAGGTCGCGCAACTCGAGGAGCAACTGCAGCACGCCCTGTTCCGCCGGGTGCGCAAGCGCTTGCAACTGACCCCGGC CGGCGAGCTGTACCTGGCCGAGGTACGACGCATCCTGCAACAGGTAGAGCTGTCCACCCGCTTCCTGCTTTCCTACGGCGGCGAGACCGAAGTGCTGCGA GTGGCGACCCCGCCGACCTTCGGCGCGCGCTGGCTGATCCCGCAACTGAACGGCTGGCGCCACCGCCACCCGAACATCCACCTCGACCTGCGCCAGGAAC TGGAACCGGACGACCTGCGCCAGGGCCATTGCGACCTGGCGTTCTTCTTCGGCCCCGGCACCCTGCCGGGCGCCGAGTGCATCCGCCTGTTCGGCGAACA ACTGGTGGCGGTCTGCGCGCCATCCCTGTTGCCGGCCGGCGGACTGGACGAACCGACCCAACTGGCGGGGCTGGTGCTGCTGCAGAACGCCAGCCGCGCG GAGGCCTGGCACGACTGGTTCACCAGCCTGGAGCGAAATTGCCAGGGTTGCTACCACGGTCCACGCTTCGACACCTTCTACATGTGCATCCGCGCCGCCC AGGCCGGTTGCGGGGTAGCCCTGCTACCGCGCTTCCTGGTCGAGGAGGAACTCGCCGAAGGCAAGCTGGCGATCGCCTGGCCGCACGCCCTGCCCAGCCA GGAGGCCTACTACCTGGCCTATCCCGAGCATGCCGCGGAAGTCCCCAAGGTGCGCCATTTCATCGAGTGGATGGTAGAGCGCCTGGAGCAGGAGCAACCC TCAGCGGGCCCCCGCCAGACGCGCCACGGCCCGGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGTTTCCGCTGCGCGGAACCATCTTTACTCTCACTCGGTTCACCTCGGAACGTCCCATGCTCACTGGCGTCACGGTTCGAATCCGCCTGCTGGTCCTGGC GCTGCTACCGCTGACGATGCTCGTCACGGTCATCGCGATGGCGCTGGCCAACGCCAGTCGACTCGATGCCAGCTTCCAGGACCTTTTCAACAACCGGATG AAGCCCATCAGCCAGCTCAAGATCGTCGCCGACGCCGTTGCGGTCAGCGTGGTCGACGCCCTGCACAAGTACCGTGCGGGGGTCTTCGATGAAGAGCGCC TGCAGCAGGAGTTGAGTGGGGCGCTGTCGCGCATCGAGAAGTCGTGGGCCGACTATTCCGCAGACCACCGGACTGCCGCCGAGAAGGAAATCATCGAGTC GCTGGTCCCCACCCTGGAACGGGTCAAGCGGATGACCCTGGCATACGGCGAGCAGGCCAGGGCCGGAAGCCTGCGAAACGTCGAGGCCGGCACGTTCAAT
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Amino Acid Sequence |
>LysR family transcriptional regulator
MLNKRRLPSMTALQCFEAVARHLSFTRAAEELSLTQSAMSKQVAQLEEQLQHALFRRVRKRLQLTPAGELYLAEVRRILQQVELSTRFLLSYGGETEVLR VATPPTFGARWLIPQLNGWRHRHPNIHLDLRQELEPDDLRQGHCDLAFFFGPGTLPGAECIRLFGEQLVAVCAPSLLPAGGLDEPTQLAGLVLLQNASRA EAWHDWFTSLERNCQGCYHGPRFDTFYMCIRAAQAGCGVALLPRFLVEEELAEGKLAIAWPHALPSQEAYYLAYPEHAAEVPKVRHFIEWMVERLEQEQP SAGPRQTRHGPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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