Pseudomonas aeruginosa PAO1, PA5198
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGATGAAGCGCCAGGCAGCGCCCGGCGAGTTCCGCTCCAACCTGCACCGAGGCGGCAGCGCCAGCCTGATCAAGATCACCCCGGAAGAACGCATGACC GCCATCCGCGCCGCCCGCGTGATGGGCCTGAACGTCGCCGGGGTGGACATCCTGCGCTCCAACCATGGTCCGCTGGTAATGGAGGTGAACTCCTCGCCGG GCCTGGAAGGTATCGAATCCACCACCGGCAAGGACATCGCCGGGATCATCATCCAGTACCTGGAAAAGAACGGCGGCCCCCACCTGGCCAGGACGAAGGG AAAGGGGTGAGCCGGACCAGACAACGCATGCGTTGTCCCGGCCCATCGGACGCACCGCATTACGCTGGCGATCCCGGCCTCGACAGAAGGTCCATGCCAC GCTTGAATGAAGCATCGCCGCAACCGATGCCGGAAACCCCGCCGAACCCTGGGCTATTCCGGCACTCGAATCCTTTCCTGACGCTTCACGGAATCGCCGC
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| DNA Sequence for Gene |
>PA5198
ATGACCTCTCGTCCCTCCTCCGACCAGACTTGGCAGCCCATCGACGGCCGGGTGGCGCTGATCGCGCCAGCCTCGGCCATCGCCACCGACGTGCTGGAGG CGACCCTGCGGCAACTGGAAGTGCACGGCGTGGACTACCATCTCGGCCGCCACGTCGAAGCCCGCTACCGCTACCTCGCCGGGACGGTCGAGCAGCGCCT GGAAGACCTGCACAACGCCTTCGACATGCCGGACATCACCGCGGTCTGGTGCCTGCGCGGCGGCTACGGCTGCGGCCAGTTGCTGCCGGGCCTGGACTGG GGGCGCCTGCAGGCGGCCTCTCCGCGGCCACTGATCGGTTTCTCCGACATCTCGGTGTTGCTCAGCGCTTTCCACCGCCACGGCCTGCCTGCGATCCACG GCCCGGTGGCCACCGGACTCGGTCTGTCGCCGCTGAGCGCCCCCCGCGAGCAGCAGGAGCGGCTAGCCTCTCTGGCCTCGGTCAGCCGCTTGCTGGCCGG AATCGACCATGAACTCCCGGTGCAGCACCTCGGCGGACACAAGCAACGCGTCGAAGGCGCGCTGATCGGCGGCAACCTCACCGCCCTGGCCTGCATGGCC GGCACACTCGGCGGCCTGCACGCCCCGGCGGGGTCGATCCTGGTCCTGGAGGACGTCGGCGAACCCTACTACCGCCTGGAGCGCAGCCTCTGGCAATTGC TCGAAAGCATCGACGCGCGCCAGCTCGGCGCGATCTGCCTGGGCTCGTTCACCGATTGCCCGCGCAAGGAAGTCGCCCACAGCCTGGAGCGGATCTTCGG CGAATACGCCGCCGCCATCGAGGTGCCGCTCTACCACCACCTGCCCAGCGGGCATGGTGCGCAGAACCGAGCCTGGCCTTACGGGAAGACCGCGGTGCTC GAGGGAAACCGGTTGCGCTGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGACGGGGCGCGCCCTTCTCCGTAAGCACGAGAGGGGGCGGGAAGTGCCGCTGGAACGGCACAAACCCGTCGGGTATCAGGCCGCGCCGCGCGGCAGCAG CAACCCCAGCGGCAGGCAGACCCGCGCTTCGAGGCCGCCGCCATCGCGGTTGCGCAGTTCGACGCTGCCGCCGTGCTGGGCGGCGATGCGCTTGACGATC GCCAGGCCGAGGCCGGTGCCCTTGCCGCCACGCGCCTTGTCGCCACGGATGAAGGGATTGAAGATGCTGTCCACTTCCGCGGGATCGATGCCCTGGCCGC GATCGAGCACGCTCAGCACCACGTAGGGCGCCGCGCTTTCGCCGGCCACGTAGCTGGCCACCTCCACCGAACCGCCGCCGTGGTTCAGGGCATTGTCGAT CAGGTTGCCCAGCAGACGCTTCATCGACACACGCCGCAACGGCATCGCCGGTACCGGTTGCAAGGCCATGCGCACCTGCTCGCGAGTCTGGTTGAACGGC
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| Amino Acid Sequence |
>LD-carboxypeptidase
MTSRPSSDQTWQPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGCGQLLPGLDW GRLQAASPRPLIGFSDISVLLSAFHRHGLPAIHGPVATGLGLSPLSAPREQQERLASLASVSRLLAGIDHELPVQHLGGHKQRVEGALIGGNLTALACMA GTLGGLHAPAGSILVLEDVGEPYYRLERSLWQLLESIDARQLGAICLGSFTDCPRKEVAHSLERIFGEYAAAIEVPLYHHLPSGHGAQNRAWPYGKTAVL EGNRLRW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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