Pseudomonas aeruginosa PAO1, PA5178
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | IPR018392 | LysM domain | 96 | 144 | 1.2E-11 |
| SMART | SM00257 | LysM_2 | IPR018392 | LysM domain | 95 | 144 | 5.6E-10 |
| CDD | cd00118 | LysM | IPR018392 | LysM domain | 94 | 143 | 5.82118E-11 |
| Pfam | PF04972 | BON domain | IPR007055 | BON domain | 22 | 87 | 5.4E-13 |
| Gene3D | G3DSA:3.30.1340.30 | - | - | - | 21 | 87 | 1.3E-8 |
| FunFam | G3DSA:3.30.1340.30:FF:000002 | LysM domain/BON superfamily protein | - | - | 21 | 87 | 1.4E-44 |
| SUPERFAMILY | SSF54106 | LysM domain | IPR036779 | LysM domain superfamily | 94 | 144 | 9.16E-7 |
| FunFam | G3DSA:3.10.350.10:FF:000001 | Peptidoglycan-binding protein LysM | - | - | 93 | 145 | 3.1E-31 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | IPR036779 | LysM domain superfamily | 92 | 145 | 5.1E-14 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.