Pseudomonas aeruginosa BWHPSA010, Q023_05578
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA010 genomic scaffold adgfl-supercont1.8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGGCCTCGCGCCAGTGCGCGCGCAGCAGGCGATGGGCGAGGCCGTGGAAGGTGCCGACCCACATGCCCGCCGGATTGATCCCGAGCAACTGCTCGATG CGGTGGCGCATCTCCGCCGCCGCCTTGTTGGTGAAGGTCACCGACAGGATGCTGTAGGGCGAGGCGTGCTCGACCTGGATCAGCCAGGCGATCCGGTGCA CCAGCACGCGGGTCTTGCCCGAGCCGGCGCCGGCGAGGACCAGTTGGCGGCCCAGCGGCGCGGCCACGGCCTGGCGCTGCGGGTCGTTGAGGGAGTTCAG CAGGAGGGAGAGGTCGTCGTTCATCGCGGCATTCTACCGGGGCGGGGAAAAGCCGGGCAAACCGGGCCGCCATTCGGCGCAGGCCGGCGCAGCGTCGGGC CTGGCCGCGGAAAAATGCTCTATCCCGGCCTTGGGCAGCCTGCCCCTGCTCGGTTATGCTCCGGCCACTTCAAGGCAAACCACTACAAGAACAAGCGCCT
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| DNA Sequence for Gene |
>Q023_05578
ATGACCGTCCATGTCGAGCCCTTGGCGCTGCCGGGCGGCAGCACCGATGTACTGCGGCTCTACGCCCGCGAAATCGCCATCGAGCGTACCCGGCTCCTTT ATCTCGGCTCGCGCACGCCGACCCTGCTCATGCTGCTCGGCGGCGTGACCAGCGCCTGCCTGGTGTGGGGCAAGGTCAGCAGTTGGCTGCTCGGCGGCTG GCTGGTCTGGCTGGTGTTGCTCGCCGTCCTGCGCCTGCTGCAGGTCGCCGCCTTCCAGCAGGCCGACAGCCGTCGCCAGGCCAGCCGCCACTGGCGGCGG ACCTTCCTGTGCGGCGCCGGCGCCTCGGGCCTGACCCTGGCGTTCGCGGTGATCATGCTGGTCCCGGCCGATGCCTTCCTCCAGCAGGTGCTGGTGTTCG GCCTGGTGGCGGCGGCGATCCTCTCCGCCAGCGTCGCCTATGCGGTGAGCCTGCCGGCCTTCCTCACCTTCGCCTTGCCGGGCCTGCTGCCATCCATCGT TTTCCTGCTGTTGCAGCCGCATAGCCTGTTGCAGGGCTGGGGCGTGCTCGGCCTGATCCTGCTGGTGGCGCTGCTGGTGGTCGCCGGGCAGATCCACCGG CTGGTGCAGGGCGCGCTGCTGCGACGCTTCCAGACCCAGGCGCTGAACCTGCACCTGGAACGCGTCAATGCGGAGGCCGAAGCGCTCAATCGCAAGCTCG CCCAGGAGGTCGGCCAGCGGCGCCTGGTCGAACGCGAGCTGCGCGCCGCCCGCGACGCCTTGCAGCGCCGGGTGGAGGCGCGCACCGAGGAGCTTGGCGC GACCAGCCAGGCGCTCAGCCAGAGCGAGGCGCGCCTGGCCATGGCCCTGGAGGCCAGCGAACTGGGGTTGTGGGACTGGGACCTGGAGAGCGGCCGGGTC CAGCATTCCTATCTCGAGGCGGTCTTCAGCGACGCCGGGGACGGTCCCGAGGACTATCGCAGGCTGATCGAAAGCATCCACCCCGGCGACCTGCCGCGTA TCCGTCGCGCCCTCGCCGAACATCTCAAGGGGCGCAGCGAGCTGTACCGGGTGGAGTACCGCGTGCGCGACCGGGAGGGCGGCTGGCGCTGGCTGGAGGA TCGTGGCCGGGCCATGGCTCGCGACCCGCGGGGACGGGTGACGCGGATGCTCGGCACGCGCAGCGACATCAGCGCGCGCAAGCGCCTGGAAGAGCAGCAG CAACTGGCCGCGACAGTGTTCGAGGCGGCCAGCGAGAGCATCGTGATCCTCGATCCGGCCTACAACCTGCTGGCGGTCAACCAGGCCTTCAGTCGCATCA CCGGCTATCGCCGCGAGGACGTGGTCGGGCGCAACGCCAGCCTGCTGGTGAATACCCCCGAGGCCCAGCGCCACTACCGGCAGATCCGCGCCGAGCTGCG CCAGCACGGGCAGTGGCAGGGCGAACTGGTGGATACGCGGAAGAATGGCGATCCCTATCCCCAATGGCTGCAGCTCAACCTGCTGCGCGACGGCAATGGC GAGGCGACCCACATCGTCGGTTTCTTCACCGATCTCAGCGCCCGCCGCGACGTCGAGGAGCGCCTGCGTCACCTGCTGCACTACGACGAACTGACCGGCC TGGCCAACCGCCGGTTGTTCCGCGAGCGGCTGCACGAGGCGGCCCAGCGGGCGCGCCAGGAGGAGGGCGGGCTGGCCCTGCTGCTGATCGACCTGGACCG CTTCAAGCTGCTCAACGACAGCCTCGGCCACGAGGTCGCCGACCAGTTGCTCAGGGAGATGGCCCAGCGCCTGCGGCGCACCGCGCCGGAAGCCAACACC CTGGCGCGTCTGGCCGGCGACGAGTTCGCCATCCTCCTCGATGGCGGCACCGGCGCCGCGGCCCTGTCGCGCCTGGCCGAACGCCTGCTGGTCCAGTTGC GCCAGCCGGTGAGCGTGCTCGGCCACGAGCTGATCCTCGGCGCCTCGCTGGGGATCAGCCTGTTTTCCGAGCAGGCGCGGGAAATCTCCGTGCTGATGAG CCAGGCGAACCTGGCGATGCAACATGCCAAGCAACTCGGCGGCAACACCTTCCAGTTCTTCCGCGACAACCTGCAGGACAGCACCCTCGAACGCCTGCGC CTGGAAACCCGGTTGCGCAAGGCGGTCGAGGAGGGCCAGCTGGACGTGCATTACCAGCCCAAGCTGTGCCTGGCCAGCGCCCGCCCGGACTCGGTCGAGG CGCTGGTGCGCTGGCACCATCCGGAGGAGGGCATGATCCCGCCGTCGACCTTCATCGGCCTCGCCGAGGAGTGCGGGTTGATCGGCGAGATCGGCGAATT CGTCCTGCGCCGGGCCTGCCTGCAGGCCGCCGAGTGGAGCCAGCGGGGCCTGAACCTGCGGGTCTCGGTGAACCTCTCGGTCCACCAGTTGCGCCAGGGC GACCTGCTCGACGTAGTGCGCTCGGCGCTGGCCGACAGCGGCCTGCCGGCGGCGCAACTGGAGTTGGAGTTGACCGAAAGCCAGTGGCTGGACGCCCTCG ACAGTGTCCTGGCGACCTTCCGCCAGTTGCGCGAGATGGGGGTGAAGCTGTCGGTCGACGACTTCGGCACCGGCTATTCCTCGCTCAGCTACCTGAAGCG CCTGCCGCTGGACTACCTGAAGATCGACCAGTCGTTCGTCCGCGACCTGACCCAGAACAGCGAGGATGCGGCGATCATCCGGGCGATCATCGCCATGGCC CACAGCCTCGACCTGAAGGTAGTCGCCGAAGGCGTGGAAACCATCGAGCAGCGGGACTTCCTGGTGGCCCAGCGTTGCGACGAGCTGCAGGGCTACCTGA TCGGCCGGCCGTTGCCGGCCCATGCCCTGGAGGAAGGTTTGCGCCAGGCTCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCGATCCGGCGGAGTATGCTGTAGCACTTTCGACTCCCACGAATTAAGGACGATTCATGCGCTCGAAGCCGCTTCTTCCCGCCCTCCTGCTGGTGGGC GCCGGTCTCTCCCCGCTGGCCCAGGCCAGCAGCGACGACTCCTGCTATCCCGATTGGTCGCTGGTCGGCGGCGGTGTCTGCGATACCTTGCCGTTCCTCG CCCCGGGCAACGACACCCGCGCCAACCTGCGCCTGCTGCTGGCCGACGCCGGCCACTGGCGGTTGGTGGAGGCGCCGCCGTCGGAGGAAGAGAAGCTCGA AGGCTACGGCCTGGTGCCGTTCGGCCTGTTCCGCCTGCTGCCCGGCGACGGCAGCCAGCCGCCCGCGCCTCCGGCGGCGAGCGAAGCCGAGACACCGCCG CCTGCGCCAGCGCCCTCGCCGCTCGCCGAACTGGCCCGGCAGATGGGCGCCGAAGCGCTACCGGAAAAGATCGCCGGCGCCGAATTCTTCGAGGGCGAGG
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| Amino Acid Sequence |
>diguanylate cyclase
MTVHVEPLALPGGSTDVLRLYAREIAIERTRLLYLGSRTPTLLMLLGGVTSACLVWGKVSSWLLGGWLVWLVLLAVLRLLQVAAFQQADSRRQASRHWRR TFLCGAGASGLTLAFAVIMLVPADAFLQQVLVFGLVAAAILSASVAYAVSLPAFLTFALPGLLPSIVFLLLQPHSLLQGWGVLGLILLVALLVVAGQIHR LVQGALLRRFQTQALNLHLERVNAEAEALNRKLAQEVGQRRLVERELRAARDALQRRVEARTEELGATSQALSQSEARLAMALEASELGLWDWDLESGRV QHSYLEAVFSDAGDGPEDYRRLIESIHPGDLPRIRRALAEHLKGRSELYRVEYRVRDREGGWRWLEDRGRAMARDPRGRVTRMLGTRSDISARKRLEEQQ QLAATVFEAASESIVILDPAYNLLAVNQAFSRITGYRREDVVGRNASLLVNTPEAQRHYRQIRAELRQHGQWQGELVDTRKNGDPYPQWLQLNLLRDGNG EATHIVGFFTDLSARRDVEERLRHLLHYDELTGLANRRLFRERLHEAAQRARQEEGGLALLLIDLDRFKLLNDSLGHEVADQLLREMAQRLRRTAPEANT LARLAGDEFAILLDGGTGAAALSRLAERLLVQLRQPVSVLGHELILGASLGISLFSEQAREISVLMSQANLAMQHAKQLGGNTFQFFRDNLQDSTLERLR LETRLRKAVEEGQLDVHYQPKLCLASARPDSVEALVRWHHPEEGMIPPSTFIGLAEECGLIGEIGEFVLRRACLQAAEWSQRGLNLRVSVNLSVHQLRQG DLLDVVRSALADSGLPAAQLELELTESQWLDALDSVLATFRQLREMGVKLSVDDFGTGYSSLSYLKRLPLDYLKIDQSFVRDLTQNSEDAAIIRAIIAMA HSLDLKVVAEGVETIEQRDFLVAQRCDELQGYLIGRPLPAHALEEGLRQAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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