Strain | Pseudomonas aeruginosa BWHPSA010 genomic scaffold adgfl-supercont1.3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCTGGCCTGCATGCCGATCATCATGCTCACCGCCAGTTCCGACGAGGCCGACCGGGTGATCGGCCTGGAACTGGGTGCCGACGACTACCTGGGCAAGC CGTTCAGCCCGCGCGAGCTGCTGGCGCGGATCAAGGCCCTGCTGCGCCGCGCGCAGTTCACCCAGGTGCGCGGTGGCGACGTACTGGCTTTCGAGGACTG GCGGCTGGACACGGTCAGCCACCGGCTGTTCCACGAGGACGGCGAGGAGTTCTTCCTCAGCGGCGCGGATTTCGCCCTGCTCAAGCTGTTCCTCGACCAT CCGCAGCAGATCCTCGACCGCGACACCATCGCCAACGCCACCCGCGGCCGCGAGGTGCTGCCGCTGGAGCGCATCGTCGACATGGCGGTCAGCCGCCTGC GCCAGCGCCTGCGCGACACCGGCAAGGCGCCGCGGCTGATCCAGACCGTGCGCGGCAGTGGCTACCTGCTGGCGGCGCAGGTGCGGCCGCACCTGCAGCC
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DNA Sequence for Gene |
>Q023_02520
ATGAGCGAACGGCGGCGCTGGTCGCCGGTGCCGCGCTCGCTGCTCGGGCGCATGCTGCTCCTGACCCTGCTCGCGGTGCTGGTCGCGCAAGGGCTTTCCA GCCTGTTCTGGCTGTCGCACCTGCGCTCCAGCCAGCGCGAGGGCCTGCTCACCAGCTCGCGCAGCCTGGCCTACTCGATGGCGGCCAGCGTCAGCTACTT CCGTTCCCTGCCGCTCGGCTACCGTCCGCTGGTGCTCGACCAGTTGCGCAGCATGGGCGGTACGCGCTTCTTCGTCTCGCTGAACGACCGGCCGCTGGAG ATGCGTGCCCTGCCGGACACGCCGAACAAGCAGGCGGTGCTGGAGATCGTCCAGGACGTGTTGCACCAACGCCTGGGCAAGGAGGTCGAGCTGCAGGTCG AATTCGTCAGTCCCGACGAGCTGCGCCTGTTCAACGGCGCGCTGAAGCTCGACGAGCTGCCGCGCTCCTGGGCGCACTACGCGCTGACCCTGGAGCCGGT GAACCCGCCGGTGCTGGTGACCCAGATCCGCATCGGCGACAGCGAGTGGCTGTACATCGCCAGCCTGATGCCGGCGCCGTACGTCAGCCTGGAACCCGAG GGACTGCAACCGCAGCAGGTGCTCTCGATCGTTTTCACCAGCCTGTTGCTGCTGCTTTTCACCGGTTTGCTGATGCATTGGCAGAGCCGTCCGCTCAAGC GCCTGGCGCGCGCCGCCCGCGACCTGGCCCTGGGCAGTCCGTCGGCAGCGCTGGAGGAGCGCGGCGCCAGCGAACTGGTGGAGGTGGCGCGCGCCTTCAA CACCATGCATGAGCGCATCGACCGCTACCTGAACGAGCGCGGGCAGTTGTTCAGCGCCATCTCCCACGACCTGCGCACGCCGATCACCCGCCTGCGCCTG CGGGTAGAACTCCTCGAGGACGAGCGCTTGCAGGAGAAGTTCGGGCGCGACCTGGACGAGCTGGAACTGCTGGTGAAGGGCGCGCTGCAGTGCGTGAAGG ACACCGATATCCACGAGAACGTCGAGCCGGTCGACCTCGACCTGTTGCTCCAGCACATCGCCGAGCCCTACCTGGCCGATGGCCGGGTGGAGGTCGTCGG TCGCGCCGCGGAGCCTTATCCGGGCAAGCCCCTGGCGCTCAAGCGCTGTATCGGCAACCTGCTGGACAATGCGCTGAAATACGGCGAACGCGCCCGCCTG AGCCTGGAGGACGGGCCGGAAGCGGTGGTGCTGCACGTCGACGACGACGGCCCCGGCGTGCCCGAGCAGCGCCTGGAACAGATCTTCGAGCCGCGCTTCC GTCTGTCTCCGCGAGGGCAGGGCTACGGGCTGGGCCTGGGCATCGCGCGCAACATCGCGCACACCCATGGCGGCGAAGTCAGTTTGCAGAACCGTCGCGA GGGCGGCCTGCGGGTCAGCCTGCGCTTGCCGCGCCTGGGGCTGGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGGGCTGGCTTGGCGGGCCCTTGAACGAGGCGGGCAGGCACGAGGTTCTCCCGCGTTCTGCGGCAGCCGCAGACAGAGGCGGAGCGGGCGCTATGGCAGT GTTTGCGCGGGCATCGATTGCTCGGGCTGAAGTTTCGTCGGCAGAAGGTTCTCGGGCCGTACATCGTCGATTTCGTCTGCCATGAGCGGATGCTGGTGAT CGAACTGGATGGCGGGCAGCATGTGGGTTCGCCGGCCGATGCCTGGCTGGAGAGCCGGGGTCCAGGGTACTGCGGTTCTGGAACGACAAGGTGCTGGCGC GCAGGGAGGTGCTGCTGGAGGTCATTCTCGTGTTGTAGGAGGTTTCTGTCGCGAAACCGCCTTGCCGAGTTCGAGTCCAGATTTTCCTGCTCTGCCTCAA TCCCAATGTAACCACTCCGTGACAAACCCGGATCGCTTCGTTACCCGCGACGCGGAACGCTTGAATAGACTCGAAGCATTGCAAGCGCAGACTTGCTCCG
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Amino Acid Sequence |
>sensor histidine kinase
MSERRRWSPVPRSLLGRMLLLTLLAVLVAQGLSSLFWLSHLRSSQREGLLTSSRSLAYSMAASVSYFRSLPLGYRPLVLDQLRSMGGTRFFVSLNDRPLE MRALPDTPNKQAVLEIVQDVLHQRLGKEVELQVEFVSPDELRLFNGALKLDELPRSWAHYALTLEPVNPPVLVTQIRIGDSEWLYIASLMPAPYVSLEPE GLQPQQVLSIVFTSLLLLLFTGLLMHWQSRPLKRLARAARDLALGSPSAALEERGASELVEVARAFNTMHERIDRYLNERGQLFSAISHDLRTPITRLRL RVELLEDERLQEKFGRDLDELELLVKGALQCVKDTDIHENVEPVDLDLLLQHIAEPYLADGRVEVVGRAAEPYPGKPLALKRCIGNLLDNALKYGERARL SLEDGPEAVVLHVDDDGPGVPEQRLEQIFEPRFRLSPRGQGYGLGLGIARNIAHTHGGEVSLQNRREGGLRVSLRLPRLGLE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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