Pseudomonas aeruginosa BWHPSA010, Q023_02388
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA010 genomic scaffold adgfl-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAACGCCGCGAACGAGGCGAAGAACGCGAAGCCCTTCAAGCCTTGCAGCGGCACCAGGCCATGCAGGGCCTTCCAGGTCGCCGCGTTGTAGAACACCACC AGAACCAGCGCGAACAGCATCACCAGCCGGGTCGAACCGATAGCCGGCAAGAAACGCTTGATACCCCCACCCATTGAAGCAACTCCTGAAACGTAACGGA CCGCCGCCACCCCCCGTGGCGGGGCGCCCGAACTCTATCGGGCGCCTGGTCAAAATTTCGTGAAGCCTCGCGAGCCCTCGCGGGCGCAGCGATCATGCCC GTGGCGATGGAGCCGGAACAAGCTCAGCTATGCCGTTTCTCCCCGGGAAAATGCCGAAACCGGCCGTATGTCGGCGGCCAGCGACTTCCTTCCATGCCGA CCTTGCAGGTGGCTCCCGCTATCTATACTGGAAGCACAATGCCACCCCCAGCCCGCACCCGCGCCGTCCGCGGGTTTTCCGTGTCCAGGGAGACACCGCT
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| DNA Sequence for Gene |
>Q023_02388
ATGGATTGGCAAGGCCTGCGCTTCCTCGGAGAGTCTCCCGTCGACGGCTACGTGCTGCAGAACTGCACCTATTCGCCGTCGCTGGTGGCGCTCGCCTTCC TCGTCGCCTGCCTCGCCGGGTACACGGCACTGGACATGGTCGAGCGGGTCGGCAACAGCCTGAGCCACCCGCGCCTCTGGCAATGGATCGGGGCGTTCTG CCTGGGCAGCGGCATCTGGGCCACGCATTTCGTCGCCATGCTCGCGTTCCACGCGCCGATCGCCCTGCGCTACGACCTGCCGATCACCGGCCTGTCGCTG CTGATCGCCGTCGCCGCCTCGTACCTGGCGATGTACATGACCGCCCGCCCGCGCTTCGGCCTGCTGCCCTGCCTGCTCGCCGCCTGCTGCATCGGCCTGG GCATCGCTGCCATGCACTACACCGGGATGGCGGCGATGCGCTCGGTGGCCACCCAGTACTACCAGCCATCGCTGTTCGCCCTTTCGGTACTGATCGCCAT CGGCGCCGCCTTCACCGCCCTCGCCGCGGTCCCCTACCTGCGCGGCCGGCGCAGCGCGCGCTACCGCTACATGAAACTGATCGCCAGCCTGCTGCTGGCC GGCGCCATCGCCGCCATGCATTTCACCGGGATGGCCGCGCTGGTGCTCAGCGTACCCGCCGGCACGCCGCTGGAACTGCAAGCCAGCGCCGACTCGCTGC GCCTGGGCTGGCTCACCGGAGTGCTCGCCAGCGCCATCGCCGCCTGCGGCATCTGGGCCGCATGGTCGGAGAAACAACGGGAGCGCCGGCTCAGCGAAAA CAGCCGGGTCAACGCCCTGCTCAACCAGCTCGACCACGCCCACGCCTCGCTGCGCCAGATGGCTCGCTACGACAGCCTGACCGGCCTGCAGAACCGCACG GCATTCAACGAAGTGTTCGTCCAGCACCTGGAGAACTGTCGCCTGAGAGGCAAGGGCCTGGCGGTGATGTTCCTCGACCTCGATCACTTCAAGCGGATCA ACGATTCCCTCGGCCACGACTCTGGCGACCAACTGCTGAAGATCGTCTCCGAACGCATCCGCAGCGTGTTGCGCGATAGCGACGTGGTGGCGCGCTTCGC CGGCGACGAGTTCTGCGTGCTCGCCGACCTCACCCAGGACCACGAGGCGCACATCCTCTCGCAACGCCTGATGCAGAAGATGAAGGAACCCATCGCCCTG GACGGGCGCACCCTGGTGATGACCGCCAGCGTCGGCGTCAGCCTCTACCCGAACGACGGCGAGCAGTGCGAGGAGCTGCTGAAGAACGCCGGCCTGGCCC TGCACCAGTCCAAGGCCTGCGGGCGCAACAACGCGCAGTTCTTCAGCCGGCAACTGCTGGTGCGGGCGACCCAGGAACTGCAGATGGAGGAGGAACTGCG CCAAGCCCTGCGCGACGACCAACTGGAGCTGCACTACCAGCCGATCCTCGCCCTCGCCGACGGCGAGGTACACCAGTTGGAGGCATTGGTGCGCTGGCGC CATCCGACCCAGGGCCTGCTCGGTCCGGACCGCTTCATCGGCCTGGCCGAAGCCAACGGCATGATCGACCAGCTCGACGACTGGGTGCTGCGACGCGCCT GCCGCGACCTGCGCAGCCTGCACCTGGCCGGCCACGAACGGCTGCGGGTGGCGGTCAACTGCTGCGCCAGCAATCTCGGCCGGGCCAGCCTGGTCGACGA AGTCCGTCATGCGCTGGAGCAGGCCGGGCTGGCGGCGTGCTTCCTCGAACTGGAGGTGACCGAGGACGCGCTGATGTACAACATCGACCAGACCATCCCG CTGCTCGAACGCCTCCGCGAGCTGGGCGTCAGCCTGTCGATCGACGACTTCGGCACCGGCTATTCGTCGCTCGCCTACCTGCGGCGCCTGCCGCTGGACG CGCTGAAGGTGGATCGCTCGTTCATCATGGACATCCCCGCCTCGCAGCGGGACATGGAAATCGCCCAGGCGATCATCGCGATGGCCCAGAAGCTCCATCT GAAAGTCGTCGCCGAGGGCGTGGAGACCCCGCAGCAACTGGCGTTCCTGCGGGAGAACCATTGCGAGCTGGTACAGGGCTACCTGTTCAGCCGGCCACTG CCGCTGGCGGCCCTGGAAGAGTTCCTCCGCGCCTACCGCTTCGACGCCGCGCCGCCGCTGCGCAGCCTGAACCAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTTCACTCGACGGCGGTCCGGTATTGCTCCACCAGGGTCGCCGGATCGCGTTCGAGATAGCCCTGGCTGCCGTGCAGACGCATCAACTGCGCGGCCAAC CCGCTCATCGGGGTGGCCGCGCCTTGCTCGCGGGACAGCTTCACCGCGGTATCGAGATCCTTGAGCAGGGTCCGTACGTGCCACTTGACCGGCTCGTAAC GGCTCTCGGCCATTTGCGGGGCGAGGATCTGCAACGGCTTCGAGTCGGCGAAGCCGCCCGCCAGCGCCGGAGCGACCAGGCTGGCGTCGACCCCGGCCCG CTCCGCCAGCGCCACCACTTCGGCGATCACCAGGGCGTTGCAGGCAACGATCATCTGGTTGCAGACCTTGGTCACCTGCCCGGCGCCCACCTCGCCCATG CGCGTCAGGCGCTGGCCAAGCCGGGAGAGGACCGGCCGCAGGCGTTCGATATCCGCTGCGCGTCCGCCGGCCATGATCGCCAGGCTGCCGCTTTCCGCGC
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| Amino Acid Sequence |
>diguanylate phosphodiesterase
MDWQGLRFLGESPVDGYVLQNCTYSPSLVALAFLVACLAGYTALDMVERVGNSLSHPRLWQWIGAFCLGSGIWATHFVAMLAFHAPIALRYDLPITGLSL LIAVAASYLAMYMTARPRFGLLPCLLAACCIGLGIAAMHYTGMAAMRSVATQYYQPSLFALSVLIAIGAAFTALAAVPYLRGRRSARYRYMKLIASLLLA GAIAAMHFTGMAALVLSVPAGTPLELQASADSLRLGWLTGVLASAIAACGIWAAWSEKQRERRLSENSRVNALLNQLDHAHASLRQMARYDSLTGLQNRT AFNEVFVQHLENCRLRGKGLAVMFLDLDHFKRINDSLGHDSGDQLLKIVSERIRSVLRDSDVVARFAGDEFCVLADLTQDHEAHILSQRLMQKMKEPIAL DGRTLVMTASVGVSLYPNDGEQCEELLKNAGLALHQSKACGRNNAQFFSRQLLVRATQELQMEEELRQALRDDQLELHYQPILALADGEVHQLEALVRWR HPTQGLLGPDRFIGLAEANGMIDQLDDWVLRRACRDLRSLHLAGHERLRVAVNCCASNLGRASLVDEVRHALEQAGLAACFLELEVTEDALMYNIDQTIP LLERLRELGVSLSIDDFGTGYSSLAYLRRLPLDALKVDRSFIMDIPASQRDMEIAQAIIAMAQKLHLKVVAEGVETPQQLAFLRENHCELVQGYLFSRPL PLAALEEFLRAYRFDAAPPLRSLNQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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