Pseudomonas aeruginosa BWHPSA011, Q024_04092
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA011 genomic scaffold adgfg-supercont1.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGACCAGCATCGCCACCAGCAGGTAGATGCCCAGCAGGCCTCCCACCACGCGCACCAGCCAGGGGCCGCCGAAGTAGGTACGCACATCATCCACGGAATT GTCCACGCGATCGCGCATGGTCCCACGACGCTTCTTCCAGTCCAGCATGGCAAGGGTCCTTAAAACAGCTCGATAGATGGGGGATTGGACCATGGCGAAC GCGTTCCGTGCCAAGCGCCAACCCTTCCAGGACGCCGAAAACCTCGGCATCGTCGGCTTTCAGCGTAGTGGAAGCCGGTTTTGTGCCGGAATGCTCAGTG AGAATTTTCCGAAACAGGCATAAGCATGCCGTAGTCCGTCGCACAAAGGCACCCACCAACAGGTGGGGATGACATTTGGAAAAGAAAAGGCTCCTCTCGT CAGCCGCCCAACGGCCGCTGGCTTTCATGGCGATAGGTGATAGCATAGAGCCATCATTCGCAGCGACGCTCTGCCGCGAAGACCACGAAAGAAGCGCGTC
|
|
| DNA Sequence for Gene |
>Q024_04092
ATGATGACCGAGCACGATGACCCGACCCTGGACCGCCTGAAGCACCACTTCGCCCAGCGAGTGATCAACCAGGCGCGCCAGGTTCTGGAGGTCTGGCAAC GCCTGACCCGCGCGGAGTGGAACAGCGACGGCATGGAAGAACTGGCCGACGCCACCCTGCGCCTGCAGCGCTACGCCGAACGCTTCGAGCAAGCCGAGCA TGCCCAGCTGGCCGGTGCCATCGACCGTACCCTGGACGTCGTCGAGGCCAACCGCGGCCGGCTTTCCAGCGAGTCGATCAGCGAACTCAACCAGTTGATG CAGCGCCTGTCGCGCACCGGCCTGCGGCATGGCGACCAGCTCGAGCACACCGTCCTGCCGCCATTGCGCAAACCGGTCTACCTGGCACTGAAGGACCGCG AACGCGCCGAGCGCCTGGCCCAGCAACTGGAGTTCTTCGGTCTGCAGGCGCTGAGCTGCGAGACCGCCGACGCCTTCCGCGCCAGCATGCGCGAACGCTA CCCGGCGGCGATCGTCATGGAAGTCGACTTCGCCGGCCCCGACATGGGCCTGCGACTGGCCAGCGAGGCCCAGGCCGGCCTCGAACACAAGCTGCCGGTG CTGTTCTTCAGCGACAGCGAGACCGACACCCCGACCCGCCTGGCCGCAGCCCGCGCCGGCGGCCAGGAATTCTTCACCGGCACCCTGGACGCCTCCAGTG TGCTGGAAAAGATCGAGACCCTCAGCCGCCTGAGCTTCTACGAACCCTACCGGGTACTGATCGTCGACGACTCCCGGGCCCAGGCGCTGCACACCGAGAT GGTCCTCAACAGCGCCGGGATCATCACCCGCGCGCTCACCGAGCCGCTGTCGGTGATGGCCGAGCTGAGCGACTTCCAGCCCGACCTGATCATCCTCGAC ATGTACATGCCCGAGTGCCTGGGCACCGAGTTGGCCAAGGTGATCCGCCAGCACGAACGCCACGTCAGCGTGCCGATCATCTACCTGTCCGCCGAGGACG ACCTGGACAAGCAGCTGGACGCCATGAGCGAAGGCGGCGACGACTTCCTCACCAAGCCGATCCGCCCGCGCCACCTGATCGCCACCGTGCGCACCCGCGC CAGCCGCGCGCGCAGCCTGAAGGCGCGGATGGTGCGCGACAGCCTGACCGGCCTGTACAACCACACCCATACCCTGCAACTGCTCGAGGACGCCCGTCTG CGCGCACGTCGCGATGGCCGTCCGCTGAGCTTCGCGATGCTCGACATCGACCACTTCAAGCAGGTCAACGACCGTTTCGGCCACCCCATGGGCGACCGGG TGATCAAGGGCCTGGCGCTGTTCCTCAAGCAACGCCTGCGCAAGACCGACCACATCGGCCGCTATGGCGGCGAAGAGTTCGCCGTGGTCCTTCCGGACAC CGACCTGGACGCCGCGCGCCTGGTGCTCGACGAGATTCGCCAGCGCTTCGCCGAGATCCACTACCCGGCGCAACCGACCGACCTGCGCTGCACCTTCAGT TGCGGCATCGCCGAGCTGACCCCGGACCTCGATATCAAGAGCATGGCCAAGCAGGCCGACGAAGCGCTGTACCGGGCCAAGCACGGCGGGCGCAACCGGA TCGAGGTATATCGTCCCAACGCTCGATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGGCCTTTTGTCATCAGCCGGTAACCGAACGGAAATAACCTGCGGTCTCGCCGTTCCGTAGTCGGACGAGACTCGCCATGCGCCTCAAGCAACTCACCAA CCTCAACACCCTGCTCCTGCTCACCGTCTGCCTCGCCCTGGGAATCACCCTGTGGTGGTCGCAACGCGCCATGGAGCGGCCCTTCCAGTTGCTCGACCAG TACCTGGAGCTGTCGCAGCGCTTCGACGAACAGGTCGCGCGCAACATCCGCCAGTACCTCGGCAGCGGCGACGCCGTGCGCCAGCAGGCCGCGCTGCAAG CCCTGGAAAGCCTCGCCGAGGCCTTGCCGGAGCTACCGCCGGACCTCGCCCGGACCCTCGCGCCAAGCCTCGCGGAGTTGCGCGAATTCAGCGCCGGCGA CCTGCTCGCCGCCGGCAAGCTCGCCGGCGACCCGCAGGGCCTGCTGCTACAGGCCGAGCGCGACCTCACCGGCAACCTGGAACAATGGTCCGCCTACCTG
|
|
| Amino Acid Sequence |
>diguanylate cyclase
MMTEHDDPTLDRLKHHFAQRVINQARQVLEVWQRLTRAEWNSDGMEELADATLRLQRYAERFEQAEHAQLAGAIDRTLDVVEANRGRLSSESISELNQLM QRLSRTGLRHGDQLEHTVLPPLRKPVYLALKDRERAERLAQQLEFFGLQALSCETADAFRASMRERYPAAIVMEVDFAGPDMGLRLASEAQAGLEHKLPV LFFSDSETDTPTRLAAARAGGQEFFTGTLDASSVLEKIETLSRLSFYEPYRVLIVDDSRAQALHTEMVLNSAGIITRALTEPLSVMAELSDFQPDLIILD MYMPECLGTELAKVIRQHERHVSVPIIYLSAEDDLDKQLDAMSEGGDDFLTKPIRPRHLIATVRTRASRARSLKARMVRDSLTGLYNHTHTLQLLEDARL RARRDGRPLSFAMLDIDHFKQVNDRFGHPMGDRVIKGLALFLKQRLRKTDHIGRYGGEEFAVVLPDTDLDAARLVLDEIRQRFAEIHYPAQPTDLRCTFS CGIAELTPDLDIKSMAKQADEALYRAKHGGRNRIEVYRPNAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|