Pseudomonas aeruginosa BWHPSA011, Q024_02777
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR34319 | MAJOR EXPORTED PROTEIN | - | - | 1 | 95 | 4.9E-21 |
| NCBIfam | TIGR03344 | JCVI: type VI secretion system tube protein TssD/Hcp | IPR008514 | Type VI secretion system effector Hcp | 1 | 97 | 6.2E-41 |
| Gene3D | G3DSA:2.30.110.20 | - | IPR036624 | Hcp1-like superfamily | 2 | 97 | 4.9E-34 |
| Pfam | PF05638 | Type VI secretion system effector, Hcp | IPR008514 | Type VI secretion system effector Hcp | 6 | 97 | 2.4E-21 |
| SUPERFAMILY | SSF141452 | Hcp1-like | IPR036624 | Hcp1-like superfamily | 2 | 96 | 3.66E-25 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.