Pseudomonas aeruginosa PAO1, PA4987
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCGGTGCTGGTCACCGACTGGCGGGGCGACTGGATCGGCCCCGGTATCGCGGAAAAGCTTGTACGCGAGGGCCACCAGGTGCGCCTGGCGGTGAACGGCA CCCACTGCGGCGAGAGCCTGCCGCTGTATGTGCGCGACCAGTTGGCCGGCGAGCTGCACCGCCTGGGTATCCCGGTCACGCCCTACGCCCGCCTGTACGG CTGCGACGATACCACGGTGTACATGCAGCACAGCGCCAGCGGCGAGGCGATGCTGTTCGAGGAGGTCGATACCCTGGTGCTATGCCAGGGCCACCAGCCG GTGGACCGCCTGGCCGACAGCCTGCACGGCCTGGCGGAGGTGTTGCGGATCGGCGACTGCCTGGCCCCCCGCACTGCCGAGGAGGCGATCTACGAAGGGC TCAAGGCCGCCTGGAGCATCTGAGCGGCGCGGCCGCGGCTCCCTCGACGGGTCCCGGCCCAGCCCCTAGAATGCCGCAAACGCAGCCAGGACCCCGCCGC
|
|
| DNA Sequence for Gene |
>PA4987
ATGCCCCGCCCGTCACCGCCGGACGCCACCGACACGCCGCGCAGCGAAACGCACTTCCTCGGCACCCGCATCCGCGGCCTGCGCAAGCGCCGCGGCCTGA CCCTGGCCGAGCTGGCCGCACAGAGCGAACTCACCGCCGGCTACATCAGCCAGTTGGAACGCAACCTGGCGTATCCGTCGATTCCGGCGCTGTTCAACAT CGCCCGCAGCCTCGGCGTGACCATCCAGTGGTTCTTCGCCAGCGAGGCCGCGGTGGACCCGGCGGACGCCGGCTACGTGGTGCGGCGCAACACGCGCATG AGCGTGCATTACGAAGACGGCATCATCGACGAACTGCTCACCCCGCAGCCCAGCCGCCAGTTGGAGATCCTCCACTCGCGTTTCCCGCCGGGCACCTACA GCCAGCAGAGCTACAGCCATGAGGGCGAGGAAGCCGGCTACATCCTCAGCGGAATCTTCGAACTCTGGGTCGGCGACCGCCATTTCCAGCTCCGCGAGGG CGACAGCTTCAGCTACTCCAGCCAGGAACCGCATCGCTACGGCAACCCGGGCGACAGCGATACCCTGGTGCTCTGGGTGATCACCCCGCCGACGTTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AACGCCCTGTCGCGATGCAGGGCCAGGGGAGGGCCGACGGGGCGAGCGCTACCCGCCGCGCCCGAGCAACCGCGCCAACCCCGCCAGCAGCCGCTCCAGG GCGCCCTGGTTGTTGCGCAGCACCTTCTCTCCGGCAGTGGCCATGGCCGTCGCGACCTCCGGCTGCGCCCACAGGCGCGCGAGGCCGTCGCACAGCTCGC CGGCATCCGTCACCTCGAGCAGCGCCCCGGCGTCGCGCAATTGCGCGGCGATGTCGAGGAAGTTGAACAGGTGCGGACCGGCGAACACCGGCTTGCCCAG GGCCGCCGGCTCCAGCAGGTTGTGCCCGCCGTTGGGCACCAGGCTGCCGCCGACGAAAGCGATGTCGGCCAGGGCATAGAGGAACAGCAGCTCGCCCATG GTATCGCCGAGCAGCACCTGGGTCGCGCGTGCCACCGGCTCGCCGCCGGAGCGCCGGACCGTGGCGAAGCCTTCGCGGCGGCATAGCTCGTGGACGCCGG
|
|
| Amino Acid Sequence |
>transcriptional regulator
MPRPSPPDATDTPRSETHFLGTRIRGLRKRRGLTLAELAAQSELTAGYISQLERNLAYPSIPALFNIARSLGVTIQWFFASEAAVDPADAGYVVRRNTRM SVHYEDGIIDELLTPQPSRQLEILHSRFPPGTYSQQSYSHEGEEAGYILSGIFELWVGDRHFQLREGDSFSYSSQEPHRYGNPGDSDTLVLWVITPPTF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|