Pseudomonas aeruginosa PAO1, PA4983

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00383
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class
Two-component regulatory systems Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Two-component System ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 7 120 5.2E-25
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 5 132 1.29E-36
FunFam G3DSA:1.10.10.10:FF:000099 Two-component system response regulator TorR - - 116 240 1.2E-36
PANTHER PTHR48111 REGULATOR OF RPOS IPR039420 Transcriptional regulatory protein WalR-like 6 239 3.9E-50
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 147 237 5.88856E-28
SUPERFAMILY SSF46894 C-terminal effector domain of the bipartite response regulators IPR016032 Signal transduction response regulator, C-terminal effector 138 238 3.4E-25
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 5 120 4.7E-38
Gene3D G3DSA:3.40.50.2300 - - - 6 93 1.5E-20
Gene3D G3DSA:6.10.250.690 - - - 94 126 9.3E-15
CDD cd17619 REC_OmpR_ArcA_TorR-like - - 5 122 2.93142E-61
SMART SM00862 Trans_reg_C_3 IPR001867 OmpR/PhoB-type DNA-binding domain 162 237 2.1E-22
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 127 243 6.1E-28
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 162 237 7.4E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.