Pseudomonas aeruginosa PAO1, PA4976 (aruH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006527 arginine catabolic process
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 17416668 Reviewed by curator
Molecular Function GO:0008483 transaminase activity
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 17416668 Reviewed by curator
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00155
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00155
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCyc ASPASN-PWY superpathway of L-aspartate and L-asparagine biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00330 Arginine and proline metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc ASPARTATESYN-PWY L-aspartate biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCAP Arginine and proline metabolism ECO:0000037
not_recorded
PseudoCAP Phenylalanine, tyrosine and tryptophan biosynthesis ECO:0000037
not_recorded
PseudoCAP Glutamate metabolism ECO:0000037
not_recorded
PseudoCyc MALATE-ASPARTATE-SHUTTLE-PWY L-aspartate degradation II 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCAP Phenylalanine metabolism ECO:0000037
not_recorded
PseudoCyc THRESYN-PWY superpathway of L-threonine biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCAP Alanine and Aspartate metabolism ECO:0000037
not_recorded
PseudoCyc PWY-5742 L-arginine degradation IX (arginine:pyruvate transaminase pathway) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCyc ASPBIO-PWY aspartate biosynthesis II 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCAP Tyrosine metabolism ECO:0000037
not_recorded
PseudoCyc GLUTDEG-PWY L-glutamate degradation II 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
PseudoCyc P4-PWY superpathway of L-lysine, L-threonine and L-methionine biosynthesis I 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 15 383 1.22E-111
FunFam G3DSA:3.40.640.10:FF:000033 Aspartate aminotransferase - - 64 284 5.5E-80
PANTHER PTHR46383 ASPARTATE AMINOTRANSFERASE - - 17 388 2.2E-113
Pfam PF00155 Aminotransferase class I and II IPR004839 Aminotransferase, class I/classII 33 382 1.9E-71
CDD cd00609 AAT_like - - 37 383 4.9695E-115
Gene3D G3DSA:3.40.640.10 - IPR015421 Pyridoxal phosphate-dependent transferase, major domain 64 284 1.8E-118
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1 IPR015422 Pyridoxal phosphate-dependent transferase, small domain 29 382 1.8E-118

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.