Pseudomonas aeruginosa PAO1, PA4958 (fimW)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCTACGACGAAGCCGCCCGTGCGCCGATCCGCCTGGAAAAAGGCGCCGAGCTCGGTCGCTTCAAGCTGGGCTCCACCGCCATCGTCCTGTTCGGCCCGC AGCAGGTCGCGTTCAACGACGGCCTCGGGGCAGCGAGCCCGGTGCGCATGGGCGAATGCCTGGCCCTGCCGAAACAGTCCTGACCTCGCCGGGACGGAGC GCCCCGAGCGTCTCCGTCCCATCTCTCCCCGCCGCCGGGACCTCCCGGCGGGATCGTGGCGTCCGAAGGCTGCGGGTCCATTTCGATGCTGCTAGAGTTC GGAAAGGTCCTATCGAGCCTGTGCCGACCCCTCGGTCAGGAAAGCGGACTGCCGCACAGTTCCTGTCCTAGCCACGACGATGAACCCGCCTCCCGTGTTA AGAAAGAGGAGGCGCAGCCGCGGCGATCGGAAGTCCGGCACCTCTCCGGGGCTTCATCCCCCCGTAGAGCCTTTTCAGTAGCGGAGCCGTCTAACCCCCC
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| DNA Sequence for Gene |
>PA4958
|fimW
ATGGAAAACCAGAGCCCCCACCTCTCGTTGCGCGTCCCCACTCCGACGCAGCAGAACCTGAGCTTCTGCGACGCCACCCCGAAGGACATCAAGTACTGGC TGGCGCACCTGCCCAAGGCCAACCTCGGGGAAACCGCGCGCCAGCTCTACCAGGGCCTGATCGAACTCAACCAGTTGGTGCTGCCCGTCGAGGCCCGCCT GCAACTGCTCGAACTGTTCCGTCCAGAGGTGCATTTCGTCTGCGCCCACCTGGAACGGCACTTCCTCAACCAGGCCATCGTCCTCGACGAACGGCCGCGC AAGATCGCCAACCTCTGCCAGGCCCTGCAGAACCACCTGGCCATCGGCTACAAGCTGATCGTGGTCCAGGAAGCGCCGCGCAACAGCCGCGACCGCGCGC AGCTGTTCGCGGTCGGCATCCAGCGGGCGATCCGCAGCCTGTGCGGGCCGCTGATCCGCGCCAGCCAGTTGTACTGCCCGGTCCCCGAGGGGCTTTGGCT GGAACTCCACCAGCTCTACCAGTTGGCCAGCCAGCGCGGCGTGCATCGTCTCGCGGTGCGCGACGAACTGGCCAAGCACACCCCCGGCCTGAGCGTCGAG CAGGCCTACCTGATTCCGCTGCTGCTCGGCTGCGCGCGCTGCAACCAGATGCGCCAGAACAACATTGCACGGCTCGCCGAGGTGCTCGAACCCTGGAGCC AGCTGCTGTCGATACAGAGCGCGACGCTGCCCGGCTCGCTGTTCATCGCCGTGCCGCAGATCGACGGCCCGCCGCGCTACCGTTCGCTGTACCCGGAGAC CCAACTGGCCAGTGCCCTGGGCATCGACACCCAGCCGCTGGTCGAGCTGATCCGCGAATACCTGCTGCAGCCCGAGGCCGAACGCGCGAAAGCACGCCTG CCGCTGATCGAAGGGGTGACCCTGGACCTGCTGCAACATCTCTCCTCGGCCTGGGGTGACATCGCCGAACGTACCTTCCAGCGCACCCAGGGCCAGGGCC AGTTGACCCTGTGCATCGGCATGAGCGCCCTGCACTACTTCCTCGCCGGGCGCCGCCCGTTCAACGAGGTCCTGCAGATCCAGGAAGCGCCCGAGGCGCC TCGCTTCAAGGCCGACGTCCAGGACGCCTGGGCCGGCGCCTTCGATGCACAGAAGGTCACCGACTGGCAGCCCGGCATGCCGCTGGAGGAAATCGAGTAC CGCCCGCACCAGTCGCCCCGCAGTGTGCAACCCGGGCACCCGCAGGCCCACGCACAGGCTGACGCCACCGAGGACTACCCGACCTACGCCCTGCCCATCG TCAACCACAGCCCCGGCGGCTATTGCCTGAGCTGGCCGAAGGAGGTGCCCGCCCAACTGCAGGCGGGCGAACTGGTCGGCCTGCAGGACCTTCCAGGCCA GGCGTGGAGCATCGCGGTGGTGCGCTGGATCCGCCAGGTACGCAATGGCGGCACGCAGATGGGCATCGAGATGATCGCCCCGGCGGCACAGCCCTGCGGC CTGCAACTGCTGCGCAAGACCGAGCAGAGCAGCCACTACCTGCGCGCCCTGCTGCTGCCGGCGATCGCCGCGATCTCGCGGCCGGCGACGGTGATCACCC CGCGCCTGCCGTTCCAGGAGGGCAGCCGGGTGCAGATCAACCTGCACGGCGAGGAGCGGCGCGCGGTGCTGAATCGCCGGCAGGCCTCGACCGGCAGCTT CAGCCAGTTCGAATACCGCTCGGCGGAACCGGTGAACACCCCGAGCGATAAGCCGGTCACAGCGCCAGTGGCCCGGCCGCCTGCGGGGGAGGAAGATTTT GACTCGCTCTGGAAGTCTCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATTGCCCCGACACCTCCATTCGCCGTCTTTTCGCGCCCGCCCGGACGCGGACTGAGCCCTTTCCATGGCCATCGAAAAGAAAACCATCCGCCTGCTGATT CTGGAAGACTCGCAGAACGAAGCCGAACGCCTGGTCAGTCTGTTCCGCAATGCCGGCCACGCGACCCGCGTACATCGACTGACCTCTCCCGAGGACCTCG CCGAAACCCTCCAGCAAAGCTGGGACCTGCTGATCGCCGCGCCGACCAGCGAGTGTCTCGAGCCCGGCGAGGCGCTCGCCACCTTGCGCCGCCAGTCGCG CGACATCCCGTTCATCCAGCTGGTGGCCGACAACAGCTCCGACGCCATCACCGACGCCTTGATGCTCGGCGCCCAGGACGCCCTGCCTCAAGGCGAGGAC GAGCGCCTGGTGCTGGTCGCCAACCGCGAGCTGGCCGGCCTCGCCGAACGCCGCGCGCGCCGCGCCGCCGAACTCGCCCTGCGCGAGGCGGAAAAACGCT
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| Amino Acid Sequence |
>FimW
MENQSPHLSLRVPTPTQQNLSFCDATPKDIKYWLAHLPKANLGETARQLYQGLIELNQLVLPVEARLQLLELFRPEVHFVCAHLERHFLNQAIVLDERPR KIANLCQALQNHLAIGYKLIVVQEAPRNSRDRAQLFAVGIQRAIRSLCGPLIRASQLYCPVPEGLWLELHQLYQLASQRGVHRLAVRDELAKHTPGLSVE QAYLIPLLLGCARCNQMRQNNIARLAEVLEPWSQLLSIQSATLPGSLFIAVPQIDGPPRYRSLYPETQLASALGIDTQPLVELIREYLLQPEAERAKARL PLIEGVTLDLLQHLSSAWGDIAERTFQRTQGQGQLTLCIGMSALHYFLAGRRPFNEVLQIQEAPEAPRFKADVQDAWAGAFDAQKVTDWQPGMPLEEIEY RPHQSPRSVQPGHPQAHAQADATEDYPTYALPIVNHSPGGYCLSWPKEVPAQLQAGELVGLQDLPGQAWSIAVVRWIRQVRNGGTQMGIEMIAPAAQPCG LQLLRKTEQSSHYLRALLLPAIAAISRPATVITPRLPFQEGSRVQINLHGEERRAVLNRRQASTGSFSQFEYRSAEPVNTPSDKPVTAPVARPPAGEEDF DSLWKSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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