Strain | Pseudomonas aeruginosa BWHPSA013 genomic scaffold adggn-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCAAGGCGGTGGTGGAGAAGTTCCGTGCCGGCGGTTTCGAGCCGGAAGGCTACACCCTCTACTCCTACGCCTCGATCCAGTCCCTGGCGGCGGCCTTCAA CGGCGCCGGCGCCAACGATCCGGCCAAGGCCGCCGAGTGGCTGAAGTCGCATCCGGTGCAGACCGTGATGGGCAAGAAGGAATGGGACAAGAAGGGCGAC CTGAAAGTCTCCGACTACGTGGTCTACGAGTGGGACGACAAGGGCAAGTACCACCAGTTGCCCTGATCGCGCTCGACCGCCATGCGCCGGGCACAGGCCC GGCGCATGGGTAAGTCCGGGAGCTGCTGAAGTGCTCGCCCGTGCTTGCCGCCGTAGTGCGGATTCACCGAAGACGTCTGCGTGTGGTCGGTCTGGAGTCC CGCGATCCGGGGCCGTTTCAGTAGCACCCGTCCGCTTTCACCGGCGAGCGCCGGCGCGCCTTACAAAGGCCGTCGCGATTCGCCCTGAAGAGACTGAAAA
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DNA Sequence for Gene |
>Q026_05515
ATGGACGGCATCTTCCTCCAGCAAATGATCAACGGGCTGACCCTCGGCTCGGTCTACGGCCTCATCGCCATCGGCTACACCATGGTCTACGGCATCATCG GCATGATCAACTTCGCCCACGGCGAGGTGTACATGATCTCCGCCTACCTGTCGGCCATCGCCCTTGCCCTGCTGGCCTTCTTCGGCCTGCAGAACTTCCC GCTGCTGATCCTCGGCACCTTGCTGTTCACCGTGCTGGTGACCTGCACCTACGGCTGGGTGATCGAGCGCATCGCCTACAAGCCGCTGCGCAACTCCACG CGTCTGGCGCCGCTGATCTCGGCGATCGGCATGTCGCTGATCCTGCAGAACTACGTGCAGGTGGCGCAGGGACCGCGCCAGCAGGGGATCCCGACCCTGC TCGACGGCGCCCTGAAATTCCACGTCGGCGACGGTTTCGTCCAGCTCACCTACACCAAGCTGTTCATCCTGATCGCTTCGCTGATCGGCATGGCGGTGCT GACCTACGTGATCCGCTACACCAAGCTCGGGCGCATGTGCCGGGCGACCCAGCAGGACCGCAAGATGGCTTCGATCCTGGGGATCAACACCGACCGGGTG ATCTCCTACGTGTTCGTCATCGGCGCGGCGATGGCCGCCCTGGCCGGGGTGCTGATCACCATGAACTACGGCACCTTCGACTTCTACGCCGGCTTCATCA TCGGCATCAAGGCGTTCACCGCGGCGGTGCTCGGCGGCATCGGCTCGCTGCCCGGGGCGATGCTCGGCGGCCTGGTGCTGGGAGTGGCCGAGGCGCAGTT CTCGGGGATGGTCAACACCGACTACAAGGACGTGTTCGCCTTCTCGTTGCTGGTACTGATCCTGATCTTCCGTCCCCAGGGCCTGCTCGGCCGCCCGCAG ATCGCCAAGGTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGGACGACGATGAGCAACGAGACTTCCATCGATCTCAAGCAGTGCGTCCTCGATGCCGTGCTCTCCGGGTTGATCGCCCTGGTGGTGTTCGGCCCCATC GTCGGCGTGGTCCTCGACGGCTACGGCTTCAACCTGCATTACGAGCGGGTCGGCTGGATCATCGCGATCGTGATGGCCGGGCGCTTCCTGCTCAGCCTCT ACCTGCAGACCCGCGGCGGGCGGGCCGTGCTGGAGCGCTTCGAGGGGGCTGGCAGCGGCGTCCACGTCCTGCCGCCGGGCTACAAGACCCGCTTGCGCTG GATCGTGCCGCTGATCCTGATGGCCGCGGTGATCTTCCCTTTCTTCGCCAGCAAGTACCTGCTGGCGGTGGTCATCCTCGGCCTGATCTACGTGCTGCTG GGCCTGGGCCTGAACATCGTGGTCGGCCTCGCCGGGCTGCTTGACCTCGGCTACGTGGCCTTCTACGCCATTGGCGCCTATGGCCTGGCGCTGGGCTACC
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Amino Acid Sequence |
>branched-chain amino acid transporter permease subunit LivH
MDGIFLQQMINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLSAIALALLAFFGLQNFPLLILGTLLFTVLVTCTYGWVIERIAYKPLRNST RLAPLISAIGMSLILQNYVQVAQGPRQQGIPTLLDGALKFHVGDGFVQLTYTKLFILIASLIGMAVLTYVIRYTKLGRMCRATQQDRKMASILGINTDRV ISYVFVIGAAMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAVLGGIGSLPGAMLGGLVLGVAEAQFSGMVNTDYKDVFAFSLLVLILIFRPQGLLGRPQ IAKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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