Pseudomonas aeruginosa PAO1, PA4951 (orn)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016775 phosphotransferase activity, nitrogenous group as acceptor
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0008408 3'-5' exonuclease activity
IGI
Inferred from Genetic Interaction 		ECO:0000012
functional complementation evidence		 26305928 Reviewed by curator
Biological Process GO:1900191 negative regulation of single-species biofilm formation
IGI
Inferred from Genetic Interaction 		ECO:0000012
functional complementation evidence		 26305928 Reviewed by curator
Biological Process GO:0016070 RNA metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0000175 3'-5'-exoribonuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00045
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.420.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcription, RNA processing and degradation Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.30.420.10:FF:000003 Oligoribonuclease - - 1 180 2.8E-82
Gene3D G3DSA:3.30.420.10 - IPR036397 Ribonuclease H superfamily 1 180 2.5E-80
SMART SM00479 exoiiiendus IPR013520 Exonuclease, RNase T/DNA polymerase III 6 179 1.1E-22
CDD cd06135 Orn IPR022894 Oligoribonuclease 7 178 2.65052E-112
Hamap MF_00045 Oligoribonuclease [orn]. IPR022894 Oligoribonuclease 2 180 44.175606
PANTHER PTHR11046 OLIGORIBONUCLEASE, MITOCHONDRIAL IPR022894 Oligoribonuclease 55 173 4.7E-23
SUPERFAMILY SSF53098 Ribonuclease H-like IPR012337 Ribonuclease H-like superfamily 2 179 2.74E-49
Pfam PF00929 Exonuclease IPR013520 Exonuclease, RNase T/DNA polymerase III 8 169 2.8E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.