Strain | Pseudomonas aeruginosa BWHPSA013 genomic scaffold adggn-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACCTTATGTAACGGTCACCGCAAGGTCCCTGCCACAAGGGCAGGCTGTCTTACGCGGCTCGCGCGTCGAGTCGCAACCCGGCAACGCCGGCTTCAACAA AACCCGCCGGACTTCGATCCGGCCGTTGGAAACCACTGTTTGGGAGAGTTACGACTATGAAGCTTCGTCCTCTGCATGATCGCGTCGTTATCCGTCGCAG CGAGGAAGAGACCAAGACCGCAGGCGGCATCGTGCTGCCGGGTTCCGCCGCCGAGAAGCCGAACCGCGGTGAAGTGGTAGCCGTAGGTACCGGTCGTGTA CTGGACAACGGCGAAGTGCGCGCTCTGGCAGTGAAGGTGGGCGACAAGGTGGTCTTCGGGCCTTACTCCGGCAGCAACGCCATCAAGGTCGATGGCGAGG AACTGCTGGTGATGGGCGAGTCCGAAATCCTCGCCGTCCTGGAAGACTGATCGGTCTCACCACTCCGTTTTCACCGAATTCGATTTAGAGGAAAGAGAAC
|
|
DNA Sequence for Gene |
>Q026_04852
ATGGCTGCCAAAGAAGTTAAGTTCGGCGATTCCGCTCGCAAGAAAATGCTGGTCGGCGTGAACGTGCTGGCCGATGCCGTCAAGGCCACCCTCGGCCCGA AAGGCCGCAACGTGGTTCTGGACAAGTCCTTCGGCGCTCCGACCATCACCAAGGACGGCGTTTCCGTCGCCAAGGAAATCGAGCTGAAAGACAAGTTCGA GAACATGGGCGCGCAACTGGTGAAAGACGTTGCCTCCAAGGCCAACGACGCTGCCGGTGACGGCACCACCACCGCGACCGTCCTGGCCCAGGCCATCGTC AACGAAGGCCTGAAGGCCGTTGCCGCCGGCATGAACCCGATGGACCTGAAGCGTGGCATCGACAAGGCCACCGTGGCTATCGTCGCCCAGCTGAAAGAGC TGGCCAAGCCCTGCGCCGACACCAAGGCCATAGCCCAGGTAGGCACCATCTCCGCCAACTCCGACGAGTCCATCGGCCAGATCATTGCCGAAGCCATGGA AAAAGTCGGTAAAGAAGGCGTGATCACCGTCGAGGAAGGCTCGGGCCTGGAAAACGAACTGTCCGTCGTCGAAGGCATGCAGTTCGATCGCGGCTACCTG TCCCCCTACTTCGTGAACAAGCCGGACACCATGGCTGCCGAGCTGGATAGCCCGCTGCTGCTGCTGGTCGACAAGAAGATCTCCAACATCCGCGAAATGC TGCCGGTGCTGGAAGCCGTCGCCAAGGCCGGCCGTCCGCTGCTGATCGTCGCCGAGGACGTCGAGGGCGAAGCCCTGGCCACCCTGGTGGTGAACAACAT GCGTGGCATCGTCAAGGTCGCGGCTGTCAAGGCTCCGGGCTTCGGCGATCGCCGCAAGGCCATGCTGCAGGACATCGCCATCCTCACCGGCGGTACCGTG ATCAGCGAAGAAGTCGGCCTGAGCCTGGAAGGCGCTACCCTGGAGCACCTGGGCAACGCCAAGCGCGTCGTGATCAACAAGGAAAACACCACCATCATCG ATGGCGCCGGTGTGCAGGCTGATATCGAAGCCCGCGTCCTGCAGATCCGCAAGCAGATCGAGGAAACCACTTCCGACTACGACCGCGAGAAGCTGCAAGA GCGCCTGGCCAAGCTGGCCGGCGGTGTTGCCGTGATCAAGGTAGGCGCTGCCACCGAAGTCGAGATGAAAGAGAAGAAAGCCCGCGTCGAAGACGCCCTG CACGCTACCCGTGCAGCGGTGGAAGAGGGCGTGGTTCCCGGCGGCGGCGTAGCCCTGGTTCGTGCCCTGCAAGCCATCGAAGGCCTGAAGGGTGACAACG AGGAGCAGAACGTCGGTATCGCCCTGCTGCGTCGCGCCGTCGAATCGCCGCTGCGCCAGATCGTGGCCAACGCCGGCGACGAGCCGAGCGTAGTGGTCGA CAAGGTCAAGCAGGGTTCCGGCAACTACGGCTTCAACGCTGCTACCGGCGTGTACGGCGACATGATCGAGATGGGCATCCTGGACCCGGCCAAGGTCACT CGTTCCGCTCTGCAGGCTGCGGCCTCCATCGGCGGTCTGATGATCACCACCGAAGCCATGGTTGCCGAGATCGTGGAAGACAAGCCGGCCATGGGCGGCA TGCCTGACATGGGCGGCATGGGCGGCATGGGCGGCATGATGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCGACCGGCCCCTGTGGTTGGAAAAGCCCCGCTTCGGCGGGGCTTTTTTATTCCTCAGTGCGGGCAGTCCTGGCGGTAGCCCGGCAGCTCCCTTGCCGC CGGTTCGCAGGCCAGGCGCAGTGCCTGCTTCAGGTCGTCGGGCAGAGTGGCGCGGCTGATCGGCCGCCAGTGCATGCGTTCGCCGAAATAGCGCGCCCAG TGGAATTCGATGAAATAGCTCTGCCGATCCTTGTCGAAGGCGTTCTCGTCCTCGGCGTAGCCGGCCAGGGCGCGGTAGGGATCGTCGCCAAGCCCGGCGA GAGCGTCCGGCAGGGCCTCGGGCGGGATCTCCGCGCCACGCGCATCGTGCAGCCAGACCCAGTGGTTTTCCTGCATCTTCTCCCAGAAGTCGCTGGCCTG GGGTAGCCGGCCGATCACCTTCACCGGCACGCCCTGTTTCGGGTCCAGGCGCCAGAGTGCGCTACTCAGGTGATGGCGATCGGTGAGGTAGAAGCGGCCG
|
|
Amino Acid Sequence |
>molecular chaperone GroEL
MAAKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLDKSFGAPTITKDGVSVAKEIELKDKFENMGAQLVKDVASKANDAAGDGTTTATVLAQAIV NEGLKAVAAGMNPMDLKRGIDKATVAIVAQLKELAKPCADTKAIAQVGTISANSDESIGQIIAEAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYL SPYFVNKPDTMAAELDSPLLLLVDKKISNIREMLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV ISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDAL HATRAAVEEGVVPGGGVALVRALQAIEGLKGDNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVDKVKQGSGNYGFNAATGVYGDMIEMGILDPAKVT RSALQAAASIGGLMITTEAMVAEIVEDKPAMGGMPDMGGMGGMGGMM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|