Pseudomonas aeruginosa PAO1, PA4934 (rpsR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACTCCTTGCCTGACCGTTCTGCGGCAGGCTGCAACCCGTAAGGAGCATTTATGCGTCATTACGAAATCGTGTTCCTGGTTCACCCGGACCAGAGCGAAC AAGTCGGTGGCATGGTCGAGCGTTACACCAAGGCCATCGAAGAAGACGGCGGCAAGATCCACCGTCTGGAAGACTGGGGCCGTCGTCAGCTGGCCTACGC CATCAACAACGTGCACAAGGCCCACTACGTTCTGATGAACGTCGAGTGCAGCGCCAAGGCCCTGGCTGAGCTGGAAGACAACTTCCGTTACAACGATGCC GTGATCCGTAACCTGGTCATGCGTCGCGACGAAGCTGTCACCGAGCAGTCCGAGATGCTCAAGGCTGAAGAAAGCCGCAACGAGCGTCGCGAGCGTCGTG AGCGTCCGAACGATAACGCTGAAGGCGCCGATGGCGACGACAACAGCGATAGCGATAACGCTGACGAGTAATTCCGGACCAGTATTGAGGAGCCAATCAC
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| DNA Sequence for Gene |
>PA4934
|rpsR
ATGGCACGTTTCTTCCGTCGTCGTAAGTTCTGCCGCTTCACCGCCGAAGGCGTGAAAGAGATCGATTACAAGGATCTCAACACCCTGAAGGCCTACGTTT CCGAAACCGGCAAGATCGTTCCGAGCCGTATCACCGGCACCAAGGCCAAGTACCAGCGTCAGCTGGCGACCGCTATCAAGCGCGCCCGCTACCTGGCCCT GCTTCCTTACACCGACAGCCACGGCCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GATCGGGCAGTCGAACGCTGGTAAGGGATAGATCGCATGCGCGCACTGGCTGAGTTCACCATGCGCGGCCGCATGCAGGCCACGCTCGCCGTGGCAGGCT CCGCGGTTGTTCCACTGTTGTTCTGGCTGAGTGCCGCCGCCGGTAGCCTGGTGCTGCTGCGGCGCGGATTCGGCGACGCCTTCGGCGTCCTGGCCTGGGC GGTGCTACCGGCGATGTTCTGGTGGTACCTGGGCGATCCGAGCATCCTTCTGGTCCTGCTCGGTACCCTGACGCTGGCGCAGATCCTGCGCGCCAGCACG TCCTGGAGCCATGTGCTGCTGGGCAGTGTTGCAGTTGGCGTGGTATTCGCGCTGGTGCTGGGGCATACCTCCAGCGAGCTGATCGGCGCCCTGGCGACGG AAGTCACCAAGGTCCTGACCCAGCTTCGCGGGGAGTCCCAGCTGTCGGGCGAAGAGCTGGACAAGTTGCAGGTGGCGCTGGTGCCGACCCTGACCGGGGT
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| Amino Acid Sequence |
>30S ribosomal protein S18
MARFFRRRKFCRFTAEGVKEIDYKDLNTLKAYVSETGKIVPSRITGTKAKYQRQLATAIKRARYLALLPYTDSHGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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