Pseudomonas aeruginosa PAO1, PA4929
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCTTGCAGCGCTGGCTGTAGACCAGGCTGGCGCGGTCCGGGCGCTTGCCGGCCAGGCCGCCGGGGGTGTAGGCGTCGTCGGAACGGACCTTCTTGTCCGC GGTGTAGCGGTTGATCATCGAGTCCATGTTGCCGGCCGCCACGCCGAAGAACAGGTTCGGCTCGCCGAGCTTCATGAAGTCGTCCTTCGACTGCCAGTCC GGCTGGGCGATGATGCCGACGCGGAACCCCTGGGCCTCCAGCAGGCGGCCGATGATGGCCATGCCGAAGGACGGGTGGTCGACGTAGGCATCGCCGGTGA CGATGATGATGTCGCAGGAGTCCCAGCCGAGCTGATCCATCTCTTCTCTACTCATAGGCAGGAAGGGCGCCGGACCGAAACACTCGGCCCAGTACTTGGG ATAGTCGAACAGCGGCTTGGCGGCTTGCATCACGGGCACCAGGGGGTATCTCTAGGAATGGGAGGGCGCGAAAACGCGGGCGCGGAATATAGCACAAAAA
|
|
| DNA Sequence for Gene |
>PA4929
ATGAGCAATTCCGACGTTTTCACTGGGTATTGCCTATCGTCGGCTGGCCTCGCAAATTGCCATCATTTCGCCACCTTCTTTCTATACTCCATCCATCGTC ATCTCACCCGGCCTCCACCAGAGGCCCCCGGGAGATTCATCGTGCGCCATCCTCTTGCCCTGCTCGCGGTCATCTTCCTGCTACTGGCCAGCGCCGTTTC GCGCGCCGCGCCGGAGTTTCCGGCGCCTCCGGCCAGCGGCGCCTGGTTGAACGGCTCGCTGGACCTGCTCGAAGACCCCGATGGCAACCTGGCGGTGGAG GACCTCGAACAAGCGGAGCAGGCCGGCCGCTTCGTCGCCGCCGCCGGCCGCACCAGCGTCGGCCTCAGCCGCAGCGCCTGGTGGCTGCGCCTCGACCTGC CGAGACGCGAGGCGGTATCCGGCGGCTGGTGGCTGGAAGTCGCCAGCGCCAGCCTGCACGACCTGCGCCTGTACCTCCCCGACGAGCGCGGCGGGTTCCG TGAACATCGCAGCGGCGAAGCGGTGCCCTTCGCCGAGGGCCGCGACCACGCCTATCGTCATCCGCTGTTCCGGATCCCTCCCGGCGATGGGCCGTTGCGC GTCTACCTGCGCAGCTACGATCCCGGCGGCAACGCCTTTCCGCTGAGGCTCTGGAGCCACGACGAACTGCTGGAATACCGCAGCCAGGGCAACCTGCTGT TCGGCATGGCCTACGGGCTGATCCTCGCCCTGCTGCTGTACAACCTGTTCCTCTTCACCAGCCTGCGCGATCGCGCCTATTTCTGGTACGTGCTGACCGC TGCCAGCGCGCTGGTGCTGACCCTGAGCATCAGCGGCCATGGTTTCGAGTATTTCTGGCCCGAGCGGGCGGTGCCCTGGTGGCTTGACCGCCTGGCGCTG CTGGCGATCTGGGGCATCTGCGTGATCCGCTTCAGCCAGAACCTGCTGCAAAGCCGGCAGCACGCACGCTGGGCCCATCACCTGCTGAACGCCTGTTGCC TGCTGTTCCTTGCCTGCCTGGCGTTCAACGCCGCCGGCTGGCGCTGGCAGGCGGCCGGCGTGCTGGCGCTGACCCTGCTGGCCAACCTGCCGATCGCCAT CGGCCTGGCAGTGCAGCGCTGGCGCCAGGGTTCGGCCACGGCGCGCCTGTACCTGGTCGGCTTCGGCCTGGTGCTCGGCAGCGTCAGCCTTGGCGTGATG CGCGCCACCGCGCTGGTCCAGCCGACCTCGGCCAACGCCATGGTCTTCCCGCTGGCGCTGACCCTGGAGGCCCTGCTGTTCTCCCTGGCGCTCGCCTCGC GCATCCAGGATCTGAAGCAGGAAAGGGCCCTGGCCCTGGACCAGGCCGACCAGGAAAAGAACGCGCGCCTGGCCCTGCTGCACAGCGCCCAGCGCGACCT GGCACGCGCCGTGGAAGTCCGTACCAACGAGTTGAGCGAGGCCAATCGCCAGTTGCAGATGCGCGAAGCGCAACTGCAGTACGCCGCCCATCACGACCCG CTGACCGGGCTTGGCAACCGCAGGCACCTGATGGAGTTCGCCGAAAGCGCCCTGGACGACGCGCGCCGCCACGGCAACAGCATGGCGCTGCTGCTGATCG ACCTGGATCACTTCAAGCCGATCAACGATACCCATGGCCACGATGCCGGCGACTTCGTCCTGCAGAACGTGGCCCAGCGGCTGCGCCATTGCGTGCGCAC CGAGGATTGCGTGGCGCGCCTCGGCGGCGACGAATTCGCCGTGCTGGTCGGCGGGTCGAATGCCGAGCAGCATGCCCGCGACATCGCCGAACGCCTGCTG CGAGAACTGGCGAAACCGGTGGAGTTCGCCAAGCAGTGGCTGGTGATCACACCGAGCATCGGCGTCGCCCTGTTTCCCGGCGACGCCCTGCAGTTCGGCA AACTCTACAAGGCCGCCGACCAGGCGCTGTACCGGGTCAAGGGCGCCGGGCGCGCCGGCTATGCGATGGCTGCCGACGATGAACGCGAGACCGCGCCGGC GCTCCCCTGGCCGACCGCCCTGGCACCGGAGCGTATCTCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ATCAGTGGCTGTAGCGTCGCGGAACCCGAGCCGTGACCTTGCTCAGAAGCTCGTAGCCAAGGGTGCCGCAGGCACGGGCGACCTCGTCCACCGACAACCC GGCGCCCCACAACTCCACCGGGTCGCCAACGCGAGCCTCCGGCAGGTCGGAGAGGTCGACCGCCAGCATGTCCATCGAGACCCGCCCGGCCAGGATCGCG CGGCGTCCCCCGACCAGTACCGGAGTCCCGGCTGGCGCGGTACGCGGATAGCCGTCGGCGTAGCCGCAACTGACCGTGCCGATCCGCGCCGGCCGCTCGG CGATCCAGGTGGCGCCGTAGCCGACGCTCTCACCCACGGCCACCTCGCGCAGTGAAATCAACTGCGCGCCCAGGCTCATGGCCGGCTTCAGGCCCAGTTC GGCAGCACTGAGGTCGGCCAGCGGGGTCGACCCGTAGAGCATGATTCCCGGCCGCAGCCAGTCCATGTGGGCGGCCGGGATAGTCAGCACCGCCGCCGAA
|
|
| Amino Acid Sequence |
>hypothetical protein
MSNSDVFTGYCLSSAGLANCHHFATFFLYSIHRHLTRPPPEAPGRFIVRHPLALLAVIFLLLASAVSRAAPEFPAPPASGAWLNGSLDLLEDPDGNLAVE DLEQAEQAGRFVAAAGRTSVGLSRSAWWLRLDLPRREAVSGGWWLEVASASLHDLRLYLPDERGGFREHRSGEAVPFAEGRDHAYRHPLFRIPPGDGPLR VYLRSYDPGGNAFPLRLWSHDELLEYRSQGNLLFGMAYGLILALLLYNLFLFTSLRDRAYFWYVLTAASALVLTLSISGHGFEYFWPERAVPWWLDRLAL LAIWGICVIRFSQNLLQSRQHARWAHHLLNACCLLFLACLAFNAAGWRWQAAGVLALTLLANLPIAIGLAVQRWRQGSATARLYLVGFGLVLGSVSLGVM RATALVQPTSANAMVFPLALTLEALLFSLALASRIQDLKQERALALDQADQEKNARLALLHSAQRDLARAVEVRTNELSEANRQLQMREAQLQYAAHHDP LTGLGNRRHLMEFAESALDDARRHGNSMALLLIDLDHFKPINDTHGHDAGDFVLQNVAQRLRHCVRTEDCVARLGGDEFAVLVGGSNAEQHARDIAERLL RELAKPVEFAKQWLVITPSIGVALFPGDALQFGKLYKAADQALYRVKGAGRAGYAMAADDERETAPALPWPTALAPERIS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|