Pseudomonas aeruginosa BWHPSA013, Q026_01860
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA013 genomic scaffold adggn-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGATTTTCGTGCTGGAAAACCAAGGGGTGGTCCAGTTGGCCTTCCTCGGAATCCAGTTTCCTCAATGGCCCCTTGCCGTCTATATCATCATTGCCTTCA TCCTTGGCGGAGCGCTGGGGCTGGCTGTCCAGCTACCGTTCCTGGCCATGTCGCGTGTGCGAGCCAGTAGCTTGCGCGCCGAGCTTGTGCAAGCTCGTAA AGAGGTCGACACCTTGCGCGCGGAACCTTCGAAAGTTTCCTGAAACTGATATTTCTGCTTGGCTTGAAAGGCACATTTCAGCGGCAGGGCGCCGAGAGAA GGCAACTAATCGAGGGTCGTCCTGTCTACTCAGGTTCTTCATTCTATGATGAAGGATCTGCATGCCAGTGCTCGCTGGCCATGGAGCGCGCGCCCAGCTT GTAATCTCCGAGCAGGCTGTCAGAATGCGACCCATTTGCCAGGCGGGTTTCGGGGCTTTTAATGGCTTACCACAAAACAGTGAAAAATATAGGTTGAACT
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| DNA Sequence for Gene |
>Q026_01860
GTGACTGACGGCATTGACTCGCGACAGATGTCCAAGCGTAACGAAATCGATTTTATCGAGCTCATTCAAGGGCTCTGGGCACAGAAGTGGCTCGTCCTTT CACTGACCTTTCTAGGTGCGGTTCTGGCGGGGAGTTATGCATTTCTAAGCAAGCCTGTATACGAGGCTCGGGTTGCCGTTTTGCCACCGTCCCTTAGCGA TGTTGCAGGGTTCAATATCGCTCGCAGTCGAGACAGCGGTCTTCCACCTTTTACCGTTAGCCAGGTTTACTCGGTGTTCATCCGAAATCTGCAGTCCGAG GGGACGCGACGGCAGTTTTTCCGTGAGGTATATCTGCCCTCCCTTGAAGAGCGAGTGGGCTCGGTTGATGGGCTGTACAGGGCGTTTTCCGACGATGTGG GCGTGAATCAGCCGACCAAGGAGCTACCGGAGCGGTACACCGTTGTGTTTGAGCGACACGATCCTGAACAAGCTGCAAAATGGGTAAAGCAATACATCGA CCTGGCCGCCCAGCGTTCGATGGATGAAATGCGCGCCAACGCCCAGCGCGAGCTCGAGGTGAAGAGTCGCAACATCCAGCAGCAGATCGACACTCTACGG CAGGTGGTCAAGGAGCGTCGCACTGACCGCATCGTTCGTCTGAAAGAAGCTCTACAGGTTGCCGAAGCTGTTGGTGTAGAAAAGCCGCCACTCATTGGCT CGCAGATCGATCAGCAATTGTCGGCCATCATGGAAGGTAGCCTCATGTATATGAGGGGGTCGAGAGCTCTTAGGGCCGAGATAGAAGCTTTGCAGGCTCG TACCTCGGACGACCCATTCATTCCTGCGCTGCGTGGTTTGCAGGAGCAACTCGCTCTGTATGAAAGCAAGCAACTGAGTTTTGATAGAGTTGCGGTTTTC CGACAAGACGGAAACGTAGAAACTCCTGATGATCCCATAAAGCCGAGAAAGATTCTCATTCTAGCCTTGGGTATTCTGGCTGGTGGTGTGCTGGGGGTAT TGGCCGCTTTGCTCCGTCTCTTGTTTCGTGAAAAGCGAATCGATATAGCGGACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGTATTCCCGGTAGGTAAGCAAAAGGACTTGATATGCAGAAGTGAGTGGATTTCCGGGCACGGTCTTCTCCTTGAGGAAGACCGTGCGTTGTTCTTTCT TTTTCGCGGAAATCAAACAGATCCCTGATTTATAGCCGTTTCAGGGGGCACTGTTTGCGAATGAGCGTTATAGGTATTTTCGAGTGGGGCGGTAATGCGG AAGAAGACTCTTTGTGTGTTTGGCACTCGGCCGGAAGCTATCAAGATGGCCCCAGTCACTCTGGCATTGGCTGGCGATGACCGTTTCGAGGCGCGAGTGT GCGTTACCGGACAGCATCGCGAGATGCTCGACCAGGTCCTAAATCTCTTCAAGATCGTCCCTGACTTCGATCTCAATATTATGCGTACAGGTCAGGATCT GACCGATGTCACTGTCGCCATTCTGCAGGGAATGAAAGAGGTTTTCGCCCAGTTCAAACCCGATATCGTCCTCGTCCACGGCGACACAGCTACGACATTG
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| Amino Acid Sequence |
>O-antigen chain length regulator
MTDGIDSRQMSKRNEIDFIELIQGLWAQKWLVLSLTFLGAVLAGSYAFLSKPVYEARVAVLPPSLSDVAGFNIARSRDSGLPPFTVSQVYSVFIRNLQSE GTRRQFFREVYLPSLEERVGSVDGLYRAFSDDVGVNQPTKELPERYTVVFERHDPEQAAKWVKQYIDLAAQRSMDEMRANAQRELEVKSRNIQQQIDTLR QVVKERRTDRIVRLKEALQVAEAVGVEKPPLIGSQIDQQLSAIMEGSLMYMRGSRALRAEIEALQARTSDDPFIPALRGLQEQLALYESKQLSFDRVAVF RQDGNVETPDDPIKPRKILILALGILAGGVLGVLAALLRLLFREKRIDIAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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