Strain | Pseudomonas aeruginosa BWHPSA013 genomic scaffold adggn-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCTCGGCCAGCGCTATCGCGAGTTGGTGCGCAGCGTCCATCCCGACCGTTTCGCCGACGCTCCCGAGCGCGAGCAGCGTCTGGCCCTGGAACGCGCGGC GCAACTGAACGAGGCCTACCAGACCCTGAAGAGCGCTCCGCGCCGGGCCCTGTACCTGTTGACCCTGAGTGGTCACGAGTTGCCCTTGGAGGCTACGGTG CAGGATCCGGAGTTTCTCCTGCAGCAGATGCAGCTGCGCGAGGAACTGGAGGAGTTGCAGGACAGCGCCGACCTGGCCGGCGTGGCGACCTTCAAGCGTC GGCTCAAGGCCGCCCAGGCCGAGCTGGAGCGCGAGTTCGCCGCGTGCTGGGACGATGCGCAGCGCCGCGAAGAGGCCGAACGCCTGGTCCGTCGCATGCA GTTCCTCGACAAGCTCGCGCAGGAAGTGCGCCAGCTGGAAGAGCGACTCGACGATTAATCCCTGCGGCCCCCGGGTCGCACCCCATAGTTAAGACAGAGC
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DNA Sequence for Gene |
>Q026_01214
ATGGCCCTACTGCAGATCGCCGAGCCCGGTCAGAGTCCCAAGCCCCATGAGCGTCGCCTGGCGGTTGGGATCGACCTGGGTACCACCAATTCGCTGGTCG CCGCGGTGCGTAGCGGCGTCGCCGAGCCCTTGCCGGATGCGCAGGGGCGCCTGATCCTGCCTTCCGCGGTGCGTTATCACGCCGAGCGGGCGGAAGTGGG TGAGAGCGCCCGCGCGGCCGCCGCGAAGGATCCCTTCAATACCATCATTTCGGTCAAGCGTCTGATGGGGCGCGGCCTGGAGGACGTCAAGCAACTGGGC GAGCAATTGCCCTACCGCTTCCGCCAGGGCGAGTCGCACATGCCCTTCATCGAGACCGTACAGGGGCTGAAGAGTCCTGTGGAAGTCTCGGCGGACATCC TGCGTGAGCTGCGCCAGCGCGCCGAAACCACCCTCGGTGGCGAGCTGGTGGGTGCGGTGATCACTGTGCCGGCTTATTTCGACGACGCCCAGCGCCAGGC TACCAAGGATGCCGCGCGCCTGGCAGGACTGAACGTCCTGCGCCTGCTCAACGAGCCGACCGCCGCCGCCGTGGCCTACGGCCTGGACAAGGGCGCGGAA GGCTTGGTGGCCATCTATGACCTGGGTGGTGGAACCTTCGACATTTCCATCCTGCGCCTGACCCGCGGTGTCTTCGAAGTCCTGGCCACCGGCGGCGATA CGGCCCTGGGCGGCGACGACTTCGACCATGCCATCGCTGGCTGGGTGATCGAGCAGGCTGGCCTTTCTGCCGATCTGGACCCGGGCAGCCAGCGGCAGTT GCTGCAAATCGCCTGTGCGGCCAAGGAGCGTCTTACCGACGAGGCGTCGGTCCGGGTCGCCTACGGCGACTGGAGCGGCGAGCTGAGCCGGGCGACGCTC GACGAGTTGATCGAGCCGTTCGTCGCTCGCAGCCTGAAGTCCTGTCGCCGAGCGGTGCGCGACTCCGGTGTCGATCTGGAAGAAATCCGCTCGGTGGTGA TGGTCGGTGGCTCGACCCGCGTGCCCCGTGTGCGCACGGCGGTTGGCGAGTTGTTCGGCTGCGAGCCGCTGACCGATATCGATCCGGACCAGGTGGTCGC CATCGGCGCGGCCATCCAGGCCGATGCCCTGGCCGGCAACAAGCGCGGCGAGGAATTGCTGCTGCTGGACGTCATTCCGCTGTCGCTCGGCCTGGAAACC ATGGGCGGGCTGATGGAGAAGGTGATTCCGCGCAATACCACCATCCCGGTGGCGCGCGCCCAGGAGTTCACCACCTACAAGGACGGCCAGACGGCCATGA TGATCCACGTGCTGCAGGGCGAGCGCGAGCTGGTGAAGGATTGTCGTTCGCTGGCGCGCTTCGAGCTGCGCGGCATTCCGCCGATGGTGGCGGGCGCGGC GAAAATCCGGGTGACCTTCCAGGTCGACGCCGACGGCTTGCTCGGCGTGTCCGCACGCGAACTGAGTTCCGGCGTCGAGGCCAGCATCCAGGTCAAGCCG TCCTATGGGCTGACCGACGGCGAGATCGCGCGGATGCTCAAGGACTCCTTCGACTACGCCGGCGACGACAAGGCTGCCCGCGCCCTGCGCGAACAGCAGG TCGAGGCGCAGCGGCTGCTGGAGGCCGTGCAATCGGCGCTGGACGTCGACGGCGAGCGGCTCCTGGACGAAGAGGAGCGCCTGGCCATCGCGGCGCAGAT GGACACCTTGCGTGAACTGGCCGGTGGTAGCGACACCGCGGCCATCGAGAACCAGATCAAGCGCCTGTCCCAGGTGACCGACGCTTTCGCCGCACGGCGG ATGGACGCGACCGTCAAGGCCGCGCTCTCCGGCCGCCGGCTCAACGAAATCGAGGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGAAGATGCCGCAGATCGTGATTCTGCCCCATGCCGACCACTGCCCCGAGGGGGCGGTATTCGAGGCGAAGCCCGGCGAAACCATCCTGGATGCCGCGT TGCGCAATGGCATCGAGATCGAGCATGCCTGTGAGAAATCCTGCGCCTGCACGACCTGCCACGTAATCGTCCGCGAAGGCCTCGACTCCATGGAGCCGTC CGACGAACTCGAAGACGACATGCTGGACAAGGCCTGGGGCCTGGAGCCTGATTCGCGGCTATCCTGCCAGGCAGTGGTGGCCGACGAGGACCTGGTGGTC GAGATTCCCAAGTACACCATCAACCAGGTGTCGGAAGGCCACTGAGCCCGGCGGTAGAGAGGAGCGTGCAATGAGCCTGAAATGGACCGATGTGCTGGAA ATCGCCATCCAGCTCGACGAAAGCAAGCCGGAGGTCGATCCGCGATACGTCAACTTCGTCGATCTGCGGCGCTGGGTGGTGGAACTTCCAGAGTTCTCCG
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Amino Acid Sequence |
>chaperone protein HscA
MALLQIAEPGQSPKPHERRLAVGIDLGTTNSLVAAVRSGVAEPLPDAQGRLILPSAVRYHAERAEVGESARAAAAKDPFNTIISVKRLMGRGLEDVKQLG EQLPYRFRQGESHMPFIETVQGLKSPVEVSADILRELRQRAETTLGGELVGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTAAAVAYGLDKGAE GLVAIYDLGGGTFDISILRLTRGVFEVLATGGDTALGGDDFDHAIAGWVIEQAGLSADLDPGSQRQLLQIACAAKERLTDEASVRVAYGDWSGELSRATL DELIEPFVARSLKSCRRAVRDSGVDLEEIRSVVMVGGSTRVPRVRTAVGELFGCEPLTDIDPDQVVAIGAAIQADALAGNKRGEELLLLDVIPLSLGLET MGGLMEKVIPRNTTIPVARAQEFTTYKDGQTAMMIHVLQGERELVKDCRSLARFELRGIPPMVAGAAKIRVTFQVDADGLLGVSARELSSGVEASIQVKP SYGLTDGEIARMLKDSFDYAGDDKAARALREQQVEAQRLLEAVQSALDVDGERLLDEEERLAIAAQMDTLRELAGGSDTAAIENQIKRLSQVTDAFAARR MDATVKAALSGRRLNEIEE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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