Pseudomonas aeruginosa PAO1, PA4860
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGTCCGGCGGCATCCAGGTGCTGCCGAACCTGGTGCTGCCGTGGAACCGTATCGTCATCATCGGCTTCGCCCTGTTCGTGCTGCTCCTCACCTGGCTGC TGCTGAACCGCACGCGGCTCGGCCTGAACGTCCGCGCGGTGACCCAGAACCGCAACATGGCGGCCTGCTGCGGGGTGCCCACAGGGCGCGTGGACATGCT CGCCTTCGGTCTCGGCTCGGGCATCGCCGGGCTCGGCGGGGTAGCCCTGTCGCAGGTCGGCAACGTCGGCCCGGACCTCGGCCAGGGCTACATCATCGAC TCCTTCCTGGTGGTGGTGCTCGGCGGCGTCGGCCAGCTCGCCGGCAGCGTCCTCGCCGCCTTCGGCCTCGGCGTGGCGAACAAGATCCTCGAACCGCAGA TCGGCGCGGTGCTGGGCAAGATCCTGATCCTCGCGCTGATCGTCCTGTTCATCCAGAAACGCCCGCAGGGACTGTTCGCCCTGAAAGGGAGGGTCATCGA
|
|
| DNA Sequence for Gene |
>PA4860
TTGAACCAGCCACTCACCGTCACCCTCGCCCGCCGGGCCGGCGGCCGCGTCACCGCTATCGCGCTCGGCGCAGCCTTCGCCACGCTGCTGGTCATGCCGC TGCTGCACCTGCTGCCGGCGGACAGCGCGCTGCACCTCTCGGCCTACAGCCTGACCCTGACCGGCAAGATCCTCTGCTACGCCATCGTCGCCCTCGCCCT CGACCTGGTCTGGGGCTACGCCGGCCTGCTGTCCCTCGGCCACGGGCTGTTCTTCGCCCTCGGCGGCTACGCCATGGGCATGTACCTGATGCGCCAGGCC TCCGGCGACAGCCTGCCGGCGTTCATGACCTTCCTTTCCTGGAACGAACTGCCCTGGTACTGGGCCGGCACCCAGCACTTCCTCTGGGCGCTGTGCCTGG TGGTGCTGGTGCCCGGCGCGCTGGCCTTCGCCTTCGGCTACTTCGCCTTCCGCTCGCGGATCCGCGGCGTGTACTTCTCGATCATGACCCAGGCCCTGAC CTTCGCCGGCATGCTGCTGTTCTTCCGCAACGAGACCGGTTTCGGAGGCAACAACGGCTTCACCGACTTCCGCAGCATCCTCGGCTTCCCGATCACCGCG CCGGGCACCCGCGCCGCCCTGTTCCTCGCCACCGTCGCGCTGCTCGCGGCCAGCCTGCTGCTCGGCTGGCGCCTGGCGCGAAGCAAGTTCGGCCGGGTCC TCACCGCGCTGCGCGACGCCGAGAACCGCCTGATGTTCTGCGGCTACGACCCGCGCGGCTACAAGCTCTTCGTCTGGACCCTGAGCGCGGTGCTCTGCGG CCTCGCCGGCGCGCTGTTCGTGCCGCAGGTGGGGATCATCAACCCCAGCGAGATGTCGCCGACCAACTCCATCGAGGCCGCCGTCTGGGTCGCCCTCGGC GGACGCGGCACCCTGCTCGGCCCGCTGCTCGGCGCCGGCGTGGTGAACGGCGCGAAGAGCTGGTTCACCGTGGCCTTCCCGGAATACTGGCTGTTCTTCC TCGGCGCGCTGTTCATCGTCGTCACCCTGTACCTGCCGCGCGGCCTGCTCGGCCTGCTGCGCAAGGAGAAGGAGCAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGACCACCCCGCACCTGATGCTCGAACCGGCCTTCCACCCCGGCCTCGATACCGCCGGCAGCGGCCGCGACGCCATCGGCCTGGGCGCCGCCACCAGCGG CCGGCTGGACGCGCGCCACGGCACCATCCTCAGCCTGGAAGACATCAACGTCAGCTTCGACGGCTTCAAGGCCCTGCGCGACCTGACCCTGTACATCGGC GTCGGCGAATTGCGCTGCATCATCGGCCCCAACGGCGCCGGCAAGACCACCCTGATGGACGTGATCACCGGCAAGACCCGCCCGCAGAGCGGTACCGCGT ATTTCGGCGACACCCTCGACCTGACCCGCATGAGCGAGGTGCAGATCGCCCAGGCCGGGATCGGCCGCAAGTTCCAGAAGCCCACGGTGTTCGAGGCCCT GAGCGTGTTCGAGAACCTCGAACTGGCGCAGAGGGCCGACAAGTCGGTGTGGGCCAGCCTGCGCGCGCGGCTCGACGGCACGCAGAGGGAACGCATCGAG
|
|
| Amino Acid Sequence |
>probable permease of ABC transporter
MNQPLTVTLARRAGGRVTAIALGAAFATLLVMPLLHLLPADSALHLSAYSLTLTGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQA SGDSLPAFMTFLSWNELPWYWAGTQHFLWALCLVVLVPGALAFAFGYFAFRSRIRGVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTDFRSILGFPITA PGTRAALFLATVALLAASLLLGWRLARSKFGRVLTALRDAENRLMFCGYDPRGYKLFVWTLSAVLCGLAGALFVPQVGIINPSEMSPTNSIEAAVWVALG GRGTLLGPLLGAGVVNGAKSWFTVAFPEYWLFFLGALFIVVTLYLPRGLLGLLRKEKEQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|