Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:1900233 | positive regulation of single-species biofilm formation on inanimate substrate | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
24603766 | Reviewed by curator |
Molecular Function | GO:0052621 | diguanylate cyclase activity | Inferred from Direct Assay | ECO:0000005 enzyme assay evidence |
24891445 | Reviewed by curator |
Biological Process | GO:1900189 | positive regulation of cell adhesion involved in single-species biofilm formation |
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:Q3KIN9
|
ECO:0000250 sequence similarity evidence used in manual assertion |
24891445 | Reviewed by curator |
Biological Process | GO:1902201 | negative regulation of bacterial-type flagellum-dependent cell motility |
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:Q3KIN9
|
ECO:0000250 sequence similarity evidence used in manual assertion |
24891445 | Reviewed by curator |
Molecular Function | GO:0052621 | diguanylate cyclase activity | Inferred from Experiment | ECO:0000269 experimental evidence used in manual assertion |
24603766 | Reviewed by curator |
Molecular Function | GO:0052621 | diguanylate cyclase activity | Inferred from Mutant Phenotype | ECO:0000315 mutant phenotype evidence used in manual assertion |
24603766 | Reviewed by curator |
Molecular Function | GO:0009975 | cyclase activity | |
|||
Biological Process | GO:1902065 | response to L-glutamate | Inferred from Mutant Phenotype | ECO:0000016 loss-of-function mutant phenotype evidence |
25331436 | Reviewed by curator |
Biological Process | GO:0000160 | phosphorelay signal transduction system |
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
PseudoCAP | Two-component System |
ECO:0000037
not_recorded |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 246 | 378 | 7.26E-30 |
PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 64 | 539 | 3.8E-93 |
Gene3D | G3DSA:3.40.50.2300 | - | - | - | 245 | 375 | 3.5E-27 |
SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 134 | 243 | 3.22E-5 |
NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 374 | 536 | 7.1E-46 |
Coils | Coil | Coil | - | - | 48 | 68 | - |
Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 379 | 533 | 2.9E-41 |
SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 366 | 537 | 2.6E-55 |
FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 372 | 538 | 8.4E-49 |
SMART | SM00448 | REC_2 | IPR001789 | Signal transduction response regulator, receiver domain | 250 | 363 | 2.8E-26 |
Gene3D | G3DSA:3.40.50.2300 | - | - | - | 112 | 243 | 1.0E-5 |
CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 379 | 534 | 8.25412E-59 |
FunFam | G3DSA:3.40.50.2300:FF:000346 | Diguanylate cyclase response regulator | - | - | 247 | 375 | 3.8E-63 |
CDD | cd00156 | REC | - | - | 253 | 353 | 5.43678E-23 |
Pfam | PF00072 | Response regulator receiver domain | IPR001789 | Signal transduction response regulator, receiver domain | 252 | 363 | 1.4E-21 |
SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 382 | 539 | 5.49E-48 |
Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 376 | 540 | 8.7E-53 |