Strain | Pseudomonas aeruginosa BWHPSA014 genomic scaffold adgeT-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTTGGCAAGGAGCTGCGGCATCGACCCGTCCGGCCTGGCCGCCACCGTCGCCGAATACAACCGCCACGCCCGCGAGGGCCGCGACCCAGAGTTCGGCCGC GGCGGCACGGCATTCAACCGCAAGCAGGGCGACCCGGCGTATCCGGGGCCGAATCCCTGCGTCGCCCCCATCGAACGCGGACCGTACTACGCGGTGCAGG TCGAGCCCGGCTGCTTCGGCACCTTCGCCGGGCTGAAGACCGACGCCCAGGCCCGCGTGCTGGACGGCGGCGGGCAGCCGATCCCCGGCCTGTACGCGGC GGGCGCGGACATGGCGAGCCTGTTCGCCGGCCACTATCCCTCCGGCGGCATCAACCTGGGGCCGGCGCTGACCTTCGGCTACATCGCCGGCCGCCATATC GCCGGCGCCCTCGGCTACGAGCAGGAGCAAGCGCAGCGCGGTTGAACGTTCCAGCGGGCGCAGCGGCCTAAACAGGCAAGCTTTCCTTCGGAACCCAAGC
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DNA Sequence for Gene |
>Q027_01636
ATGAGCGCAGCGCCACCGGATATCCCCGCCCTGCCCGCCGGCCTCTGCTACGTCGACGACCGCCAGCCGGGCATCCGTCGACGCCGGCAGGGCAAGCGCT TCGTCTATTTCGATGCCGACGGCCAGCGCATCGGCGACGCCGAGGAGATCCGCCGGCTGGACAAGCTGGCCATTCCGCCGGCCTATCGCGAGGTCTGGAT CTGTCCCGACCCCAACGGCCATCTCCAGGCCACCGGCCGCGACGCCCGTGGGCGCAAGCAGTACCGCTACCACCCGCGCTGGCGCGAGGTACGCGATGCC GACAAGTACGAGCGCCTGCTGCGCTTCGGCCAGGCGCTGCCGCGGCTGCGCCGGCACATCGACGCCCAGTTGCGCCTGCCCGGCCTCGGTCGCGACAAGG TGGTGGCCCTGGCGGTTGCGCTGCTCGACGCCACCCTGATCCGCGTCGGCAACCACCGCTACGCCCGCGACAACCGCTCCTACGGCCTGACCACCCTGCG TACCCGGCACGTGGACGTGAACGGCAGTCGCATCCGGTTCCGCTTCAAGGGCAAGAGCGGCATCGAGCACGACGTCAGCCTGGAGCATCCGCGCCTGGCG CGGGTGCTGCGGCGCTGCCTGGAATTGCCCGGCCAGGACCTGTTGCAGTACCTGGACGAGGACGGCCAGCCGCACCGCATCGGCTCCCACGACATCAACG AGTACCTGCGCCGGCATACCGGCGAGGATTTCAGCGCCAAGGACTACCGTACCTGGGCCGGCAGCGCGCTGGCGCTGGAGCGCCTGCGGCGTGCCGAAGC CGACGGGCTTGGCGCGGTGGTGGCGGAGGTCGCCGCCGAATTGGGCAACAGCGTGGCGATCTGCCGGCAATGCTACATCCACCCGGCGATCATCGAGGCC TACCAGGCCGGGCAACTGGGCCAGCTCAGGCGCGCCCGCAAGCGCCGCTGGCTGAGTGCCGAGGAAGCGACCCTGCTGGCCTTCCTCGACACGCCCGGCT GA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCAGTTGCCCGGGTGCGGATCGATGCCGTGCCGGCGCAGCAGGCCGAGCAGGCGGCCAATCTCGGTCTGGCAGGCTTCCAGTTCCTTGCGCAGGGTGTGT TCGCGGCGCTGCTGCTCCAGCTTCACGCGTTCGAGTTCGGCGCGCGCCTCACGGCGGATCTGCCGCTCGCGCTCCTTGTCGGAATGCTCGGCGCCGAGGG CCTCTTCGGCCTTGCGCGCGCGGTATTCGCGCATCCGCTGGGCGGCCGACTTGGCCTTGCCGCTCGGCTTGGGCCCGGGTTTGCTGGCTTTCATGAACGC CTCCATCTGCGTAACGTTACGCAATCAGAATAGCGTAACGTTACACAGATAGACAGGGTCTATGCTTAGAGCGGCGGGGCCGAGCGCAGCATCACCGACT TCAGCGCGAAGGCCGACTTGATGCCAGCCACGCCGGGAATGCAGGTCAGGGTATTGGTGAGGAACGCCTGGTAGGCGGCGAGATCCTTGACCACAACCCG
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Amino Acid Sequence |
>DNA topoisomerase
MSAAPPDIPALPAGLCYVDDRQPGIRRRRQGKRFVYFDADGQRIGDAEEIRRLDKLAIPPAYREVWICPDPNGHLQATGRDARGRKQYRYHPRWREVRDA DKYERLLRFGQALPRLRRHIDAQLRLPGLGRDKVVALAVALLDATLIRVGNHRYARDNRSYGLTTLRTRHVDVNGSRIRFRFKGKSGIEHDVSLEHPRLA RVLRRCLELPGQDLLQYLDEDGQPHRIGSHDINEYLRRHTGEDFSAKDYRTWAGSALALERLRRAEADGLGAVVAEVAAELGNSVAICRQCYIHPAIIEA YQAGQLGQLRRARKRRWLSAEEATLLAFLDTPG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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