Pseudomonas aeruginosa PAO1, PA4781

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0071111 cyclic-guanylate-specific phosphodiesterase activity
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 19170727 Reviewed by curator
Biological Process GO:2000147 positive regulation of cell motility
IMP
Inferred from Mutant Phenotype 		ECO:0000015
mutant phenotype evidence		 19170727 Reviewed by curator
Biological Process GO:1900231 regulation of single-species biofilm formation on inanimate substrate
IMP
Inferred from Mutant Phenotype 		ECO:0000015
mutant phenotype evidence		 19170727 Reviewed by curator
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Motility & Attachment Other PAO1 genes in this class
Cell wall / LPS / capsule Other PAO1 genes in this class
Transcriptional regulators Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Two-component System ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 13 160 1.2E-38
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 13 124 8.1E-26
CDD cd00077 HDc IPR003607 HD/PDEase domain 176 318 7.25535E-17
PANTHER PTHR45228 CYCLIC DI-GMP PHOSPHODIESTERASE TM_0186-RELATED - - 4 369 7.5E-96
Gene3D G3DSA:3.40.50.2300 - - - 4 141 6.7E-38
Coils Coil Coil - - 361 388 -
CDD cd19920 REC_PA4781-like - - 13 115 2.844E-47
SUPERFAMILY SSF109604 HD-domain/PDEase-like - - 153 353 1.82E-26
FunFam G3DSA:3.40.50.2300:FF:000328 Two-component system response regulator - - 4 141 2.1E-69
Pfam PF13487 HD domain - - 236 305 1.9E-16
Coils Coil Coil - - 155 175 -
Gene3D G3DSA:1.10.3210.10 Hypothetical protein af1432 - - 151 368 9.8E-72
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 11 124 3.2E-37
SMART SM00471 hd_13 IPR003607 HD/PDEase domain 173 324 8.6E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.