Strain | Pseudomonas aeruginosa BWHPSA015 genomic scaffold adggh-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GATCTCGATCTCAACACCGGCAGCAACGCAGCCGAACAGATTCTCGGTCACGCCCGTTACGCGCTGCTCCTGCAATCGCGCCTGGCAGGCCTGGCGCCGC CGCTGGACGGCGTCTATCCGGCGATCCAGAACCGTGTCGGACTGGTCGAGGCAGTGCGCTTCGCTCGCGACATGGGCTTCGGCGGGTTGCTGTGCATCCA TCCGAGCCAGGTCGAGCCGATCCACCAGACATTGATGCCGAGTCTCGCGGAACTGGAATGGGCGCGTCGGGTGGCAGAGGCCGGCGCCTCCGGTGCCGGC GTCTTCGTGGTCGACGGCGAGATGGTCGACGCGCCGGTGCTGGGACGCGCGCGACGCCTGCTGGAGCGGGCCGGGGAGGGTGGCTGAACGCGTTCGACAG ACGCGAACGCGGGCTTGAGCAATGGCGAATTCTCCGAACGCGCCGGCTGCGTCAGGCTCGTCGATACCTCGAAAGCACAACAACAATCTGAGGTCACGAA
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DNA Sequence for Gene |
>Q028_04330
ATGTTCAAGACGATGGTACGGGCGCTGTTGTGCGCCCTGGCGATCGGTGGCTCCTGCCTGGCGAATGCCGCGCAGCCGATCGTCATCAAGTTCTCCCACG TGGTCGCGGAAAACACGCCCAAAGGCCAGGGCGCGCTGCTGTTCAAGAAACTCGTCGAACAGCGCCTGGGCGGCCGGGTCGAGGTAGACGTCTATCCCAA CTCGTCGCTGTTCGGCGACGGCAAGGAAATGGAGGCGCTGCTGCTGGGCGACGTGCAGATGCTGGCGCCGTCCCTGGCCAAGTTCGAGCAGTACACGCGC AAGGTGCAGATCTTCGACCTGCCGTTCCTCTTCGACGACATCCAGGCGGTCGACCGCTTCCAGCGCAGCCCGCAGGGGCGCGCCTTGCTGACCAGCATGC AGGGCAAGGGCATCCTCGGCCTGGCCTACTGGCACAACGGGATGAAGCAGCTCTCCGCCAATCGCCCGTTGCTGGAGCCGGAAGACGCGCGCGGGCTGAA ATTCCGCGTGCAGGCGTCCGACGTGCTCAACGAGCAGTTCCGCCAGCTCCGCGCGATCTCCCGGAAGATGTCCTTCGCCGAGGTCTACCAGGGCTTGCAG ACCGGCGTGGTGAATGGCACCGAGAACACCTGGTCGAACTACGAGAGCCAGAAGGTCAACGAGGTACAGAAGTATTTCACCGAGTCCAACCACGGCTTGG TGGACTACATGGTGATCACCAACGCGAAGTTCTGGAACGGCCTTCCGGCGGACATCCGCGAAGAACTGCAGCGGATCATGGACGAGGTCACCGTGCAGGT GAACCTCGAGGCCGAGCGCCTCAACCGCGACGCCCGCCAGCGCATCCTCGCCAGTGGCGCCAGCGAGATCCATACCCTGAGCCCGCAGCAGCGCGCCGAC TGGCGCCAGGCGATGCAGCCGGTATGGCAGAAATTCCGCGGCAATGTCGGTGCCGATCTGCTCCAGGCCGCCGAAGCTTCCAACCGTCCCGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCGTCCGGCCCCGCCCGGCCGGGCGGGGCATTGTGGAGAACGCTGCGATGAATCGACTCGTGCGCGTCTGGAACCGCTTCGAGGAGGGCGCTATCGCCT TCCTGCTGGCGGCGATGACGCTGGTGACCTTCCTCTATGTGGTGATGACCAACGTCTTCACCCTGTTCTACGACCTCGGCGACCGCCTGCCGACACTGCG GGCTCCGCTGTACTCGATGGGCGACGCGATCCTCGGGGTAGCCCAGGATATGTCCTGGAGCAACGCGCTGACCAAGGCGCTGTTCGGCTGGCTGATCTTC CTCGGCATCGCCTACGGCGTACGCACCGCCGGCCACCTCGGGGTGGATGCCCTGGTGCGCCTGGCGCCGCGTCCCTTGCAGCGCCTGATCGGGATACTCG CCTGCCTCTGCTGCCTGGGCTACGCCGGGCTGTTCATGGTCGCCAGCTACGACTGGGTGAAGACCCTGTTCGTCGCCGGCATCGGCGCCGAGGACCTCGA
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Amino Acid Sequence |
>C4-dicarboxylate ABC transporter
MFKTMVRALLCALAIGGSCLANAAQPIVIKFSHVVAENTPKGQGALLFKKLVEQRLGGRVEVDVYPNSSLFGDGKEMEALLLGDVQMLAPSLAKFEQYTR KVQIFDLPFLFDDIQAVDRFQRSPQGRALLTSMQGKGILGLAYWHNGMKQLSANRPLLEPEDARGLKFRVQASDVLNEQFRQLRAISRKMSFAEVYQGLQ TGVVNGTENTWSNYESQKVNEVQKYFTESNHGLVDYMVITNAKFWNGLPADIREELQRIMDEVTVQVNLEAERLNRDARQRILASGASEIHTLSPQQRAD WRQAMQPVWQKFRGNVGADLLQAAEASNRPD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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