Pseudomonas aeruginosa BWHPSA016, Q029_03510
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA016 genomic scaffold adgfN-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGTCGCCCCGCTTTAGATTGGCGAGAAGCGCGGCCAGGCCGATTCGATCGGCCTTGGCGCCGCTGGCAGTGTCTTCGAACACTCGCTCGCAACCCGCC TTGGCCATCGCATCGCGTTGCAGGTCCAGTAGTTGATCGTCGGTGGAAATGCGCACGTACCCAATCAGTATGATTTCGTTCAGAAATGCGCGAAAGGCAG CATAGGTGAATTTTGAAAGCGAGAAATCGTTACTGGACTAAAAGTACGCGGCTTCTGGGGGCGGCCAAGGGGAACGAGGCTGGCGTCCAGAAAACGGTCG TCTGATGGACGCTTCCACGAACGGAGCGATACCGCAAAGGGAAGAATGGAGTGCAACCATCGTAGAGCTTCAAACTGAGATATTGCAGTTGATTGCCGCA TCTGGCCGGCCTATTGCCGTGCATTTTCTACCCACTACTGCATCGCTCAAGAAGGTTCTGTAAATATATTGGTTCAACTCTTTCGATAGGAAAGCCATTC
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| DNA Sequence for Gene |
>Q029_03510
ATGACAAATAATAGTGCGCCACCACTTGTCGTGACCAGAGGAAATGATAATGGTTACGAGCCTGGGTCGATGGTTATTACGCATGTACAGGCTAGTGGGC TAGACATAATCCAGTACATTCCAGGTCGGTCAAGCTACGGTACTCCACCATTTGTCCCGCCAGGACCAAGCCCGTATGTTGGCCCTGGAATGCAAGAGTA CAGGAGGCTAAGAGATACTCTTGATAAGTCCCATTCAGAACTCAAGAAAAACCTGAAGAATAAAACCTTGAAGGAGGTAGATGAACTCAAGAGTGAAGCG GGGTTGCCAGTTAAAGCGGTCAGTGCCAATGGCATCCGCGATGAAAAGAGTATCGTTGATGCACTCATGGATGCCAAAGCAAAATCGCTAAAGGCCATTG AGGATCGCCCGGCCAATCTTTATACGGCTTCAGACTTTCCTCAGAAGTCAGAGGCGATGTACCAGAATCAGTTGCTAGCCAGTCGAAAGTTCTATGGAGA GTTCCTTGATCGACATATGAGTGAGCTGGCCAAAGCGTACAGCGCTGATATCTATAAGGCGCAAATCGCTATCTTGAAACAAACGTCTCAAGAACTGGAG AGTAAAGCCCGGTCAATGGAGGCGCAAGCCCAGCAGGTCACTCAACAGCTCGGTGCCGACTTCAACGCGATCACCACTCCGACCGCCACCAAGGTCCAGC AACGTGTGAAAGCAGTGGATGCTAGTCTGTCTCAGGTTTCCACCCAGGTCAGTGGTGCAGTCGCCTCGGCAACCCAGGCGGTGCAGGTCAAGACAGCGCA AGCCCAGCAACAAGCCAACAGCCAGATTTCGTCCAGCCAGAACCTGATCAGCGCGGCATTTCGGAATCAGATTGCCTTGGCAGCACAGGCCAGTGGAGAA GCCCAGGTCACGGCTTTCAACACCAAAGTCAAGCAGATCGTCAACGAAGCCACGGCGTTTTCGACAGCACGAAAACAAGCGCTGGCTCAGTTTGCTGCCA ATGCGGCCGCCGAGGTCGAAACCGAGGTCAACAGGCTAACCGCCCAGGTCAAGGCCAGCCCCACCAAGGCGGCTTCGCAAGCTGCACAAGCAACCCTTCG ACAATTCACTGAAAGCACCTATGCCAAGGTGAACACCTATGCCCAGCAGACCGAAGCAGCGCTGCAGGCCAAAGCCAAGGAGGTTTCGGCAGCGGTAGCC GAGGCACAGCGTGCGGCGACCAACGATTTGCAAAAAACAGCCGATGTAGTACCAGGTCAGATCATTCAGGCTGCAAACACCTTGGCGATGCCGGCTACCT CTACGCCGCTGGTTTCGGTGGCCGGGTTTGGTAGTGCGGCAGTGGAGACGGCTCGCCTGGCGGCTTCCCTAACGAATGCTGTCAATCGCCTGGTTCAGAT TGCTGGTAGTGGACCCGGCGCATACTTTGCCACCTTCGCGGTGCTGTCGCTGTATTCCGACCAGGCTGGTAAAGACAGGGACAAGGTTCCTGCCGGCGTT CGCAATGCATTGGCACTGGAGGCGTCCGCTCTGGGGCTTCCTGGCACGGCTGATTTGCAAAGCGTCGCCAAGGCAGGTGGCACGGTTGATATGCCGGTAC GACTCACGAGTGCTGCACAAGAGAGCCCGAGAGGTAAATCGCAGATTGCCGCGATGTTGACCAACGGTGCAACTGTCCCCAAGGGCGTGCCTGTTCGCGC CGCGACCCTCAATGCTGCGACGGGCCGGTATGAGGTGACGGTTCCCGCAAAGTCCACCGTGCCGAATACACCACCGCTGATCTTGACCTGGACCCCTGCC ACCCCTCCAGGAAGCCAGAACCCCTCAAGCACCACTCCGGTCGTACCGCAGCCGGTTCCGGTGTATGAGGGAGCAACGATCACCCCAGTACAGGCCGAGC CGGAGTCCTATCCGGGAGTGCCGTTAGATCTGGACGATCTGATCGTGATCTTCCCGGTGGGCTCGGGGGTTAAGCCAATCTATATAATGTTCAATCATAA CCCTCATGATGTTGTTATTGATGATAAGATCAGAGAGCAAATTCCAATTAGAGGGTGGACTGAGGTTGAAATTAGAGATGTTATCGGAAAAGGTGCAACA GGTAGTTCTTCAGATAAGCGTCGGCCTAATAAGGCGATAGATGGGCTGGGGCGGAATGACTCTGCAACAGTATATGGAAGTCCTCCTAATGGATATATAG TTGTGAACGATAGGACAGGTGAAATTATTCAAATTGCAGATCGGAACGATTCCGCATGGGCGGTTGACGGGCGAATCATCTGGAGAAATAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGATCAATCCTAACTCTGTCGAAATAGTTGACAATGGCCTAGATTTTTTTTCAAAAGAAGGCAATGGGAAGATGTGGCTAACTACGAAGGCAACTCTGGA AGTCGTATCTTTGGCAACTAAAAAAGGGTTGGCAATTTCAAAAATTGAGGGATTCATCTGGCATAAGGATGTAGGGAGGTTCGAGGCAAGACTTGATGCC ATATTTGAAGGGCTTGTCAATCCAGTAAAAGTGCCTGATGTTGTCAATAATAATAACACTAGAGCGAAAGAGAGTACAGAGGAAGATGCTTCTCTTGGGC ATGATGCTTTTATTGTAACAATTGCCTCCAGAAAATAAAGGTGGAAACCTTGGGGCTGAGTTGGCTTGCAATCCCTTGCATGGACTACAAACAATATAGG CTCAGCCCCCTTAGGGATGGTCTGAAGTAGCCATGTCTTTCTGGCCGACTTCAGCCCCCGGCGAATTTGAAAGCGGAGAATCGATTAAAAACGATCCGAT
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| Amino Acid Sequence |
>S-type pyocin protein
MTNNSAPPLVVTRGNDNGYEPGSMVITHVQASGLDIIQYIPGRSSYGTPPFVPPGPSPYVGPGMQEYRRLRDTLDKSHSELKKNLKNKTLKEVDELKSEA GLPVKAVSANGIRDEKSIVDALMDAKAKSLKAIEDRPANLYTASDFPQKSEAMYQNQLLASRKFYGEFLDRHMSELAKAYSADIYKAQIAILKQTSQELE SKARSMEAQAQQVTQQLGADFNAITTPTATKVQQRVKAVDASLSQVSTQVSGAVASATQAVQVKTAQAQQQANSQISSSQNLISAAFRNQIALAAQASGE AQVTAFNTKVKQIVNEATAFSTARKQALAQFAANAAAEVETEVNRLTAQVKASPTKAASQAAQATLRQFTESTYAKVNTYAQQTEAALQAKAKEVSAAVA EAQRAATNDLQKTADVVPGQIIQAANTLAMPATSTPLVSVAGFGSAAVETARLAASLTNAVNRLVQIAGSGPGAYFATFAVLSLYSDQAGKDRDKVPAGV RNALALEASALGLPGTADLQSVAKAGGTVDMPVRLTSAAQESPRGKSQIAAMLTNGATVPKGVPVRAATLNAATGRYEVTVPAKSTVPNTPPLILTWTPA TPPGSQNPSSTTPVVPQPVPVYEGATITPVQAEPESYPGVPLDLDDLIVIFPVGSGVKPIYIMFNHNPHDVVIDDKIREQIPIRGWTEVEIRDVIGKGAT GSSSDKRRPNKAIDGLGRNDSATVYGSPPNGYIVVNDRTGEIIQIADRNDSAWAVDGRIIWRNK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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