Strain | Pseudomonas aeruginosa BWHPSA016 genomic scaffold adgfN-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGCAGGTCCATCGCGGGGAGATGGCGCCGGGCCCAGCGGCACGACGCGCAGCCTTCGCTGGTGAATACCAACAGCGAAACCCCTTCCAGGGCAAGCAAC TGCCGGTCGGCGTCCAGATCGGTGAGTTCCAGGGACGGCACGCTGCTGACCTCGATAGAAAGGAAGAAATGGGGCCCGACCATCATCCGTAGGCTTCGGC TCCTGCGATAGCGCTGGCGCCCTCCTCGGCCAGCGGATACGCGCAAGGCGCGCCCCTCCGCAGCACCTGCACAATATCGTCCGCGGCGGCCTCACCTGCA ACTCCGCTGGCAGCCTTGGCCCGGAGCAACGAAGAAAACGTGCGCAAAGCGGGGAAAACACCGGCGAACCGCGTCCCGCCCATTGTCTAGGCCCGGCCCG ACACGTTAAGGTTCGTCTCCCCGTTTGCGAACTTCATGCCTGCGCCCTTTCGCAGGGGGCCTCCCGGCGGCCGGCGCCCGTGACCTGATTGAGTACCACG
|
|
DNA Sequence for Gene |
>Q029_01094
ATGGCTGATTTACAGATCGACGACCTTAACGTTGCCTCCAACGAGACCCTGATCACGCCGGAGCAGCTCAAGCGTGAAATTCCCCTGACCGACAAGGCCC TGCAGACCGTGGCCCATGGTCGCCAGGTGGTGCGCGACATCCTGGATGGCAAGGACCACCGTCTGTTCGTGGTGATCGGCCCCTGCTCCATCCACGACAT CAAGGCCGCCCACGAATACGCCGACCGCCTCAAGGCGCTCGCGGCCGAAGTGGCGGATACGCTGTTCCTGGTGATGCGCGTGTACTTCGAGAAGCCGCGT ACCACGGTGGGCTGGAAAGGCCTGATCAACGATCCGTACCTGGACGACTCGTTCAAGATCCAGGATGGCCTGCACATCGGTCGCCAACTGCTCCGCGACC TCGCCGAGAAAGGCTTGCCCACCGCCACCGAAGCGCTCGACCCGATTTCCCCGCAGTACCTGCAGGACCTGATCAGCTGGTCGGCGATCGGCGCCCGTAC CACCGAATCGCAGACCCACCGCGAGATGGCCTCCGGCCTGTCTTCCGCGGTCGGCTTCAAGAACGGCACCGATGGCAGCCTGACCGTGGCGATCAATGCC CTGCAGTCAGTCTCCAGCCCGCATCGCTTCCTCGGCATCAACCAGCAGGGCGGCGTATCCATCGTCACCACCAAGGGCAACCGCTATGGTCACGTGGTGT TGCGCGGCGGCAACGGCAAGCCGAACTACGATTCGGTCAGCGTCGCGCTCTGCGAGCAGGACCTGAACAAGGCGAAAATCCCGCTGAACATCATGGTCGA CTGCAGCCACGCCAACTCCAACAAGGACCCGGCCCTGCAACCGCTGGTGATGGACAACGTCAGCAACCAGATCGTCGAAGGCAACAACTCGATCGTCGGC CTGATGGTGGAAAGCCACCTGGGCTGGGGCAGCCAGCCGATTCCGAAGGATCTCGACCAACTTCAGTACGGCGTCTCCATCACCGATGCATGCATCGACT GGGCGACCACCGAGAAGAGCATCCGCAGCATGCACGCCAAGCTCAAGGACGTGCTGCCGAAACGCCAGCGCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGAGGCGGAAACGAAAACGCCGGGCTGATGCCCGGCGTTTTTCATTGCGCACCTGCTCAGGCGGCCGGATCGGCCTGACGCTGGCGACGCTCGATGTAA CGCTCCACGTAGGAGCAGGACGGGATCACGCTGTAGCCCATGCGGTCGGCGTACTGCAGGGCGTGTTCGGTCAGCGCGGCGGCGATACCGCGACCCCGCA GCGAATCCGGTACGAAGGTCCGGTAGATGTCCAGCGTCTGCTTGCCCAGGTCCATATACGCCAGATAGGCACGATGGCCATCCACCGTCGTCTCGAACTG ATGGCCGCCCACGTCATGATGGATGGACAGGGACTCGCTCACTTTGGATCTCCTCAACGGGTTCGTAACCCGACCCGCGCCTGATTGATAGGGTTCCTCG CGAGGATGCCCCCGCGTACCGGCCTTCAGCAGGCCGCCGGATAACTTCGTCCGTTCTCGTCCCGGCGGCTGAGCGCGCCTGGCGGACATCCTCGAAACGG
|
|
Amino Acid Sequence |
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLQIDDLNVASNETLITPEQLKREIPLTDKALQTVAHGRQVVRDILDGKDHRLFVVIGPCSIHDIKAAHEYADRLKALAAEVADTLFLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRQLLRDLAEKGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGSLTVAINA LQSVSSPHRFLGINQQGGVSIVTTKGNRYGHVVLRGGNGKPNYDSVSVALCEQDLNKAKIPLNIMVDCSHANSNKDPALQPLVMDNVSNQIVEGNNSIVG LMVESHLGWGSQPIPKDLDQLQYGVSITDACIDWATTEKSIRSMHAKLKDVLPKRQRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|