Pseudomonas aeruginosa BWHPSA016, Q029_01003

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BWHPSA016 genomic scaffold adgfN-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCTGCACCAACCAGAACCTGCCCCAACGGCTGCGCCTGGGCGATATCTGCGTCGCTTGCGAAGGTACGCCGGAGTTCCTCGGTTTCCGCAATATCACCC CGGCGACGCCGAGCTACGCGCCGCCGCTGAACCGCGATTTCCTCTGGAAACTGATCAGCAACATGTCGCTCAACTACCTGTCGCTGGCCAACGTCGACGC ACTCAAGGTGATCCTCGAAACCTACGACCTGCCGCGCTACTACGACCAGCATGCGGCGAAGGTCAGCAAGCGCCTGCTGGGCGGGCTCAAGGCGGTCCGC CACGAGCATGTCGACCGCCTGCATCGGGGCCTGCCGCTGCGCGGCTTGCGTACCGAGCTGACGATCGATCCGGAAGGCTACATCGGCGAGGGCGACCTGT TCGTGTTCGCTTCGGTTCTGAACGAATTTTTCGCGCTTTACGCCAGCATCAACTCCTACCACGAGTTGCGGGTGAGGAGCACACAGGGAGACGTGTACCA
DNA Sequence for Gene
>Q029_01003
ATGGAAACCGCGCATGGGTTTGCAGCCCCTGCTGTAAGCGCGCTGGCCCGGGGCATTCGCGAGTACTCGCTGTTCCAGGCGGTCCTGCTGGTCATGGATC GCCTGCGCCAGGAACATCCCGGCCTGGGAGACGAGGCGCTCTACGATCAGTTGGAATTCCAGGCCAATCCTAGCCTCGGCTTCCCGGGCAGCGATGTCGA TCGGGTGGAGTTCTTCGAAGAGCGCGGCATGCTGCGGGCGCGGCTGCGTTTCAACCTGATCGGCTTGTTCGGTGCCAGTTCGCCGTTGCCGGCGTTCTAC AGCGAGCAGGCTCTGGGCGACAGCGAGGAGGGCAATCCTACGCGGAACTTCCTCGATCTCTTCCATCACCGCCTGCATCGGCTGCTGTTGCCGATCTGGC GCAAGTACCGCTACCGGGTGAGCTTCCAGAGCGGCGCGAGCGATGCGTTTTCCGCCCAATTGTTCGCCCTCGTCGGATTGGGCGGGGAAGAGATCCGCAA GGCCAGGGAACTGAACTGGAAACGCCTGCTGCCCTACCTGGGCCTGCTCAGCCTGCGGGCGCACTCGGCGGCCTTGATCGAGTCGGTGCTGCGCTACTAC TTCAAGCATGCCGAACTGGTCGCCGAGCAGTGTATCGAACGGCGCGTCGCGATCCTCGAAGAGCAGCGCAACCGGCTCGGCCTGTTCAACAGCCAGCTTG GCGAAGACGCGGTGCTGGGCGAACGGGTCCGCGACCGCAGCGGCAAGTTCCGCATTCATATCCGCCAGCTCGACTGGCAGCGCTTCCACGAGTTCCTGCC GATCGGTCCCGGCTACCAGCCGCTTTGCGCGCTGGTTCGCTTCACCCTGCGCGACCCGCTCGACTACGACATCCGGCTGGTCTTGCGCCACGAGGAAATC CGTGAGTTCCGCATCGGCGCGCAGAACGCCTGCCGCCTTGGCTGGACCAGCTGGCTGGGCCGGGAGCGCGCCGATGGCGTGGTGACGCTGGGCAGCAAGA TTCATTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGATGGATGAGCATGATCAACGTAGACCTGCAACAACTGATTCAGGCGCTGGATGCCGACACCCGGCGCGACCTCGAAGGCTCGGCCGAGCGCTGCGTAG CCCGTGGCGGCAGCAAGGTACTGGTGGAGGACCTGTTGCTGGGTCTGCTGGAGCGTCCCCAGGGACTGCTGGCGCGCGCCCTGCAGGATGCCGCGGTGGA CGCCGGCGAACTCAACGCCGCGTTGCAAGCGCGGGGCGAGCACAGCGCCTCGCGCAATCCGGTGTTCGCGCCCGAGCTGGTGCAGTGGCTGCAGGATGCG CTGTTGCTGGCCAACCTCGAACTGGGCCGTAGCCAGATCGACCAGGCGGCATTGATCCTGGCCCTGCTACGCAACCCGTTGCGCTATGCCGGCAGCCGCT ACCAGCCGCTGCTGGCGCGGCTCGACATCGAGCGGTTGAAGGATTTCGCGCTCTCGCAGCCGCTGGAGGGCGCGCCCAGCGGCAAGCCGGGCGGCGGCGA
Amino Acid Sequence
>type VI secretion protein
METAHGFAAPAVSALARGIREYSLFQAVLLVMDRLRQEHPGLGDEALYDQLEFQANPSLGFPGSDVDRVEFFEERGMLRARLRFNLIGLFGASSPLPAFY SEQALGDSEEGNPTRNFLDLFHHRLHRLLLPIWRKYRYRVSFQSGASDAFSAQLFALVGLGGEEIRKARELNWKRLLPYLGLLSLRAHSAALIESVLRYY FKHAELVAEQCIERRVAILEEQRNRLGLFNSQLGEDAVLGERVRDRSGKFRIHIRQLDWQRFHEFLPIGPGYQPLCALVRFTLRDPLDYDIRLVLRHEEI REFRIGAQNACRLGWTSWLGRERADGVVTLGSKIH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site