Pseudomonas aeruginosa BWHPSA017, Q030_01533
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BWHPSA017 genomic scaffold adgeW-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGAAAGCGGCCGAGGAGGCCAAGAAGAAGGCTGCTGCGGAAGCGGCGAAGAAGAAAGCCGCCGTCGAGGCCGCCAAGAAAAAGGCCGCCGCCGCTGCCG CGGCAGCCCGCAAGGCTGCCGAGGACAAGAAGGCGCAGGCATTGGCCGAGTTGCTTTCGGATACGACCGAGCGCCAGCAGGCCCTGGCCGACGAGGTGGG CAGCGAGGTCACCGGCAGTCTCGACGACCTGATCGTCAACCTGGTGAGCCAGCAGTGGCGGCGTCCTCCATCGGCGCGTAATGGAATGAGCGTAGAAGTA CTGATCGAAATGCTGCCGGACGGTACCATCACCAATGCCAGCGTCAGCCGTTCGAGTGGCGACAAGCCTTTCGACAGTTCGGCGGTGGCGGCGGTGCGCA ACGTCGGCCGTATTCCCGAGATGCAGCAATTGCCGCGGGCTACCTTCGACAGCCTGTATCGTCAGCGCCGCATCATCTTTAAACCGGAGGATTTGAGTCT
|
|
| DNA Sequence for Gene |
>Q030_01533
GTGAGTACCCTGATTCGCATTGCGCTGTTCGCCCTGGCCCTGGTGGCAGGTGCTGCGCAGGCTGCCGACCCGCTGGTGATCTCCAGCGGTAACGACCGTG CCATTCCCATCGCCGTGGTGCCGTTCGGCTTCCAGGGGGGCAACGTGTTGCCGGAAGACATGTCCAATATCATCGGCAACGACCTGCGCAACTCCGGCTA CTTCGAGCCGCTGCCCCGGCAGAACATGATCAGCCAGCCGGCGCAGGCCAGCGAAGTGATCTTCCGTGACTGGAAGGCAGTTGGCGTCAACTACGTGATG GTCGGCAACATCGTGCCTGCCGGCGGACGCCTGCAGGTGCAGTACGCATTGTTCGATGTCGGCACCGAGCAGCAGGTCCTGACCGGCAGCGTGACCGGCA GCACCGATCAGCTCCGCGACATGTCGCACTACATCGCCGACCAGTCGTTCGAGAAGCTCACCGGTATCAAGGGCGCGTTCTCCACCAAGATGCTCTATGT CACCGCCGAGCGTTTCTCGGTCGACAACACCCGCTACACCTTGCAGCGCTCCGACTACGACGGCGCCCGCCCGGTGACCCTGCTGCAGTCGCGCGAGCCC ATCGTGTCGCCGCGCTTCTCGCCCGATGGCCGCCGTATCGCCTATGTCTCCTTCGAACAGAAGCGCCCGCGTATCTTCATCCAGTACGTCGATACTGGCC GTCGTGAGCAGATCACCAATTTCGAGGGCCTGAATGGCGCTCCGGCATTCTCCCCTGACGGCAACCGCCTGGCCTTCGTCCTGTCGCGCGACGGCAACCC GGAAATCTACGTCATGGACCTTGGCAGCCGCGCCCTGCGCCGCCTGACCAACAACCTGGCGATCGATACCGAACCCTTCTGGGGCAAGGACGGCTCTACC CTGTACTTCACCTCGGACCGTGGCGGCAAGCCGCAGATCTACAAAATGAACGTGAACAGCGGTGCCGTGGACCGGGTAACCTTCATCGGCAACTACAACG CCAACCCGAAACTCTCGGCCGACGAGAAGACCCTGGTAATGGTCCACCGCCAGCAGGGCTACACCAACTTCCAGATCGCCGCCCAGGACCTCCAGCGCGG CAATCTGCGGGTGCTGTCGAACACCACTCTGGACGATTCGCCCACTGTTGCGCCCAATGGCACCATGCTAATCTACGCCACCCGCCAGCAGGACCGGGGC GTGCTGATGCTCGTATCCATCAACGGACGCGTACGGATACCTCTCCCTACCGCTCAGGGCGATGTGCGCGAGCCTTCCTGGTCCCCTTACCTGAACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGGTCGCCAACGGTTACAAACTTATACACTGGGGTTCATTAGGAGTTACATGATGGAAATGCTGAAATTCGGCAAATTTGCTGCGCTGGCTCTGGCCATG GCTGTGGCTGTGGGTTGCTCCTCCAAGGGCGGCGATGCTTCCGGTGAAGGTGCCAATGGCGGCGTCGATCCGAACGCAGGCTATGGCGCCAACAGCGGTG CCGTTGACGGCAGCCTGAGCGACGAAGCCGCTCTGCGTGCGATCACCACCTTCTACTTCGAGTACGACAGCTCCGACCTGAAGCCGGAAGCCATGCGCGC TCTGGACGTACACGCGAAAGACCTGAAAGGCAGCGGTCAGCGCGTAGTGCTGGAAGGCCACACCGACGAACGCGGCACCCGCGAGTACAACATGGCTCTG GGCGAGCGTCGTGCCAAGGCCGTTCAGCGCTACCTGGTGCTGCAGGGTGTTTCGCCGGCCCAGCTGGAACTGGTTTCCTATGGTAAAGAGCGTCCGGTCG
|
|
| Amino Acid Sequence |
>translocation protein TolB
MSTLIRIALFALALVAGAAQAADPLVISSGNDRAIPIAVVPFGFQGGNVLPEDMSNIIGNDLRNSGYFEPLPRQNMISQPAQASEVIFRDWKAVGVNYVM VGNIVPAGGRLQVQYALFDVGTEQQVLTGSVTGSTDQLRDMSHYIADQSFEKLTGIKGAFSTKMLYVTAERFSVDNTRYTLQRSDYDGARPVTLLQSREP IVSPRFSPDGRRIAYVSFEQKRPRIFIQYVDTGRREQITNFEGLNGAPAFSPDGNRLAFVLSRDGNPEIYVMDLGSRALRRLTNNLAIDTEPFWGKDGST LYFTSDRGGKPQIYKMNVNSGAVDRVTFIGNYNANPKLSADEKTLVMVHRQQGYTNFQIAAQDLQRGNLRVLSNTTLDDSPTVAPNGTMLIYATRQQDRG VLMLVSINGRVRIPLPTAQGDVREPSWSPYLN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|